Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00663 ATGTGGGGAACACTACACACCTTATCTTTCAGTCGGGTCATTTTAATTTTTCTCCTACGCTCATCCTCACTGTCAGTGTTAACCCTCTTCTCCTTCCACGCATGCATACGGCTCAACCCTTCGTGTAAAATGGAGATCACGAGCAGCAATAACAGCTGCAGCAGCATGATATGGTTTTTCAAAGATAAAGGGTTTGATGAGAACAGTGTGCAAGGAATTTTCCGACGGTGTAGGCGCCTTGAGGATGTGCATCAGGACAGAGCAAGTGAAAATTGGGAGTATTTGAGAAGCATTGGCATTGAAGAAAGAAAGTTGCCCACAATTGTTTCAAAATGCCCCAAGATTCTTGCGCTGGATCTTTATGACAAGATTATGCCCACGGTTGAGTGTCTCAGGACTCTGGGAACAAAACCACGTGAGGTTGCTACTGCCATAGCCAAGTTCCCTCACATACTCTCAAACAGTGTGGAAGAGAAGCTTTGTCCCCTTTTGGCCTTCTTTCAGGCTTTGGGTATCCCTGAAAAGCATATTGGGAAAATGATACTGCTCAACCCTAGGCTTATAAGCTACAGCATTGAAACAAAGTTGACTGAAATTGTGAACTTTCTTGCTAGCCTTGGTCTCAATAAAGATGGAATGATCGGAAAAGTTATAGTTAAGGACCCCTATATTATGGGTTATAGTGTTGAGAAAAGACTCCGCCCTACTTCACAGTTCCTCAAGTCAATAGGTCTGAGTGAGCAGGATCTTCAAGCAGTGGCTGTGAACTTCCCAGCAATCTTAAGTAGAGATGTGAACAAGCTTTTGGTACCCAATTATAGGTATCTAAAGAGGCGTGAATTTCAAGACAGACAGATAGTTGCTTTGGTGGTTGGTTTTCCTCCTATCTTGATCAAGAGCATCCAGAATTCATTAGAACCGAGGTTCAAATTTTTAGTTGATGTGATGGGAAGACAAGTTGATGAAGTTGTTGATTATCCTTGTTTCTTTTATCATGGCCTCAAGAGAAGAATAGAGCCACGGTACAAACTTCTAAAGGAGAGGAATTTAAATTGTAGCTTGAGTGAAATGTTGGATTGCAATAAGAAGAAGTTCTTCATGAAATTTGGCTTGTTAGAAGGACATACCTTGAGTAACTAG 1140 0.4175 MWGTLHTLSFSRVILIFLLRSSSLSVLTLFSFHACIRLNPSCKMEITSSNNSCSSMIWFFKDKGFDENSVQGIFRRCRRLEDVHQDRASENWEYLRSIGIEERKLPTIVSKCPKILALDLYDKIMPTVECLRTLGTKPREVATAIAKFPHILSNSVEEKLCPLLAFFQALGIPEKHIGKMILLNPRLISYSIETKLTEIVNFLASLGLNKDGMIGKVIVKDPYIMGYSVEKRLRPTSQFLKSIGLSEQDLQAVAVNFPAILSRDVNKLLVPNYRYLKRREFQDRQIVALVVGFPPILIKSIQNSLEPRFKFLVDVMGRQVDEVVDYPCFFYHGLKRRIEPRYKLLKERNLNCSLSEMLDCNKKKFFMKFGLLEGHTLSN 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00663 379 Pfam mTERF 139 365 IPR003690 GO:0003690|GO:0006355
Phco6g00663 379 Pfam mTERF 44 157 IPR003690 GO:0003690|GO:0006355
Phco6g00663 379 PANTHER CGI-12 PROTEIN-RELATED 176 297 IPR003690 GO:0003690|GO:0006355
Phco6g00663 379 SMART mt_12 142 173 IPR003690 GO:0003690|GO:0006355
Phco6g00663 379 SMART mt_12 251 282 IPR003690 GO:0003690|GO:0006355
Phco6g00663 379 SMART mt_12 215 246 IPR003690 GO:0003690|GO:0006355
Phco6g00663 379 SMART mt_12 71 101 IPR003690 GO:0003690|GO:0006355
Phco6g00663 379 SMART mt_12 320 351 IPR003690 GO:0003690|GO:0006355
Phco6g00663 379 SMART mt_12 287 319 IPR003690 GO:0003690|GO:0006355
Phco6g00663 379 SMART mt_12 178 209 IPR003690 GO:0003690|GO:0006355
Phco6g00663 379 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Phco6g00663 379 Gene3D Transcription termination factor 3, mitochondrial 149 373 IPR038538 -
Phco6g00663 379 FunFam transcription termination factor MTERF6, chloroplastic/mitochondrial 141 373 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phco6g00663 mTERF 4.1e-48 No_clan