Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00637 ATGAAGATTCCTTTTTTTACTTGTTTTTCTTCAGCCACCAAAGAACAAAACAATAACGACAATCCGGAGGGAGAGATCAACGATGGGAGCTTCCGTTTGTTCACTTACAACCAATTGAAATTGGCCACGCGTAATTTCCATTCCTCGGAGAAGGTTGGAGAAGGTGGCTTTGGCACTGTCTATAAGGGGAGGCTTCTGGATGGTTCTTTTGTGGCGGTGAAGGTGCTTTTGGTTGAGGTGGAATCCATGAGAGGAGAGAGGGAATTTGCGGCGGAATTGGCTACACTTGCAAACATCAAGCACCAAAATCTTGTAAGCTTGAAAGGGTGTTGTGTGGAAGGTGTTCATAGATATTTGGTCTATGATTATATGGAGAACAATAGCCTTTACAAAGCTTTTTTAGGTTCGGAGGAGAGAAGAATGAGATTCAGTTGGCAAACAAGGAAGGAAGTATCCATAGGGGTTGCTCGGGGACTTGACTTTCTCCACGAAGAGCTTAAGCCTCATATCGTACACAGAGACATCAAAGCCAAAAATATTCTTCTTGATCGGAATTTCACTCCAAAGGTTTCAGATTTCGGTTTGGCAAAATTGCTAAGAGACGAAGCTTCTTACATCAGCACTCGGGTTGCAGGGACACTGGGTTATCTAGCTCCAGAATATGCCAATTCTGGACAGGTTTCACGAAAATCAGATGTTTACAGCTTTGGAGTGCTACTTCTGCAAATTGTGAGTGGCCTAGCAGTGGTGGATGCCTATCAAGACTTCGAACGCTTCATAGTGGAGAAGGTGTGGATAGCGTATCAATCTAACGATTTGTTAAAACTGGTGGATCCCATGCTGAACAAAAATTTTCCGGAGGAAGAGGCCATAAAGTTCCTCAAGGTGGGGCTACTATGCGTGCAAGAAACCGCGAAACTTCGGCCACGAATGTCAGAGGTTATGGAGAAATTAACCAACAACGTTGATATGAAAGATGTTCACGTTTCGAAACCAGGGTTCGTTGCTGATCTCGGGAAGATCAGAATCAAAAAACAAAACTCTTCCCACGAAAGAAGTTCTTCTGGAGCAACCTTCACAAGCTCCATTTGGAGTTCAGCTTATCTTGCTCGTTAG 1116 0.4382 MKIPFFTCFSSATKEQNNNDNPEGEINDGSFRLFTYNQLKLATRNFHSSEKVGEGGFGTVYKGRLLDGSFVAVKVLLVEVESMRGEREFAAELATLANIKHQNLVSLKGCCVEGVHRYLVYDYMENNSLYKAFLGSEERRMRFSWQTRKEVSIGVARGLDFLHEELKPHIVHRDIKAKNILLDRNFTPKVSDFGLAKLLRDEASYISTRVAGTLGYLAPEYANSGQVSRKSDVYSFGVLLLQIVSGLAVVDAYQDFERFIVEKVWIAYQSNDLLKLVDPMLNKNFPEEEAIKFLKVGLLCVQETAKLRPRMSEVMEKLTNNVDMKDVHVSKPGFVADLGKIRIKKQNSSHERSSSGATFTSSIWSSAYLAR 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00637 371 Gene3D Transferase(Phosphotransferase) domain 1 124 332 - -
Phco6g00637 371 ProSiteProfiles Protein kinase domain profile. 46 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00637 371 Pfam Protein kinase domain 46 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00637 371 SUPERFAMILY Protein kinase-like (PK-like) 30 330 IPR011009 -
Phco6g00637 371 SMART serkin_6 46 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00637 371 CDD STKc_IRAK 52 320 - -
Phco6g00637 371 FunFam Putative LRR receptor-like serine/threonine-protein kinase 124 330 - -
Phco6g00637 371 FunFam Serine/threonine-protein kinase receptor 14 123 - -
Phco6g00637 371 Gene3D Phosphorylase Kinase; domain 1 7 123 - -
Phco6g00637 371 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Phco6g00637 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Phco6g00637 371 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 30 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00637 Phco-Chr6 6335393 6337131 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco6g00637 Pkinase 2.8e-48 CL0016