Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00606 ATGCCTGCTAGAAGATCCAACTACTCGCTCCTCAGCCAAATTCCTGACGACCAGTTTTCCGGCGCCTCCGCACCGTCCTCCTCTGGTGACGGAAAGGCCGGCCGCGCCGGCAAGTCGGACCGCTTCTCCGAGTGGGACCTCATCGCCGATCACAGGGCGGGTCAGCAGGGGGCCAACCGGATCGGAAACCTGTACTCCTCGGTCGGCCTGCAGAGGCAGTCCAGCGGGAGCAGCTACGGCGAGAGCTCGCTCTCCGGCGGCGGCGACTTTTACGCTCCGACGCTGTCTACGGCGGCGGCCAGTGACGTTGACGCCTTCGGCTATTTCCACGACGAGCGGAGCAAGTTCTCCGAGGCTCCGGCGAGGATCGCGGGGTCTTTCGGGAAGAGCTGGGCACAGCAGACGGAGGAGAGCTACCAGCTGCAGCTCGCGCTCGCGCTGCGTCTCTCGTCGGATGCCACGTGCGCGGATGATCCCAATTTCCTCGATCCGATGCCGGACGATGGGGCCTTGCGGCTATCGTCATCGGCGGAGGCGGTTTCGCATAGGTTTTGGGTGAATGGCTGTCTGTCATACTCTGACAAAATTCCAGATGGCTTTTACTTGATTCACGGGATGGATTCCTTTGTATGGACTGTGTGCACTGATCTGCATGAAAATGGCCGAATTCCTTCAGTTGATATGCTGAAGTCTGTGAATCCCACCATTGTTTCTTCAGTTGAAGTAGTTTTGGTAGATCAACACAGTGACCCCAGCTTAAGAGATCTGCAAAATAGAGCTCATAACATTTCTTGTAGCAGCATAACAACATCAGATGTTGTAGATCAGCTTTCCAAGCTGGTTTGCAACCGTATGGGGGGATCAGCTCCTGTTGGGGAAGATAATATTGTTTCCATCTGGAGGGATTGCAGTAATGATCTTAAAGATTGCCTAGGATCTGTTGTTATTCCTATAGGTAGTCTATCTGTTGGCCTCTGCAGGCATCGTGCTATATTATTCAAAGTACTAGCTGACGCCATTGATTTGCCATGTCGAATTGCAAAGGGCTGTAAATATTGCAAAAGGGATGATGCCTCGTCTTGTCTTGTACGATTTGGGCTCGAGAGGGAATATCTTGTGGATTTAATTGGAAAGCCAGGACACTTATCTGAGCCTGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTTCTTCACCCTTGCGCTTTCCACGACTTAAACCAGCTGAACCTACCATTGATTTCAGGTCACTGGCCAAACAGTATTTCTCGGACTGTCTCTCTCTTGAGCTCGTCTTTGACAACAGTTCTGCAGAGCAGTTTGATGGGAAGTACAAAGACAGGAATAACCCCAGGCCAATTTCAACAGACAACAATAGAAATTCCCACCTTCCTCTCCATCCCCAAGATTCTCATCTGAGCACACGTGAACAATTTTCTGAAACATATATACCATCTGATGCTCCTCAGAACATTGTAGACTCGACAGTGGGAAAGTATCCACCACCAATAAAACATAAGCGTGCTGTTGGTGTACCTACCCCATTAGCACTTACAAACACTAATGATGACATGATTGAGGGCAAGAGGTTTATTGAAGGAAGTCAACTGATTCCTAGCAAACATACTCGAGAGCTTACGCTTGACATGGAGGATTTGGACATCTCGTGGAGTGATCTTGTTTTAAGAGAGAAAATTGGGTCAGGTTCTTTTGGAACTGTACATCGTGCTGAGTGGAATGGCTCAGATGTTGCTGTGAAAATTTTGATGGAACAGGATTTTCATGCTGAGCGCTTCCAGGAGTTCCTGAGGGAGGTTTCAATAATGAAACGTTTGCGGCATCCAAATATTGTTTTGTTTATGGGGGCAGTCACACAGCCCCCTAACTTATCAATTGTCACGGAATATTTGTCAAGGGGTAGCTTATATAGGCTGTTGCATAGATCTGGTGCCAAAGAGGTGTTGGATGAGAGGCGTAGGCTTAGTATGGCTTATGATGTGGCAAAGGGGATGAATTATCTTCATAAACGTAATCCCCCCATTGTTCACAGAGATCTGAAATCTCCAAACCTTCTCGTTGACAGGAAATATACAGTGAAGGTTTGTGATTTTGGGCTTTCCCGTCTGAAGGCCAATACGTTTCTCTCATCCAAGTCAGCTGCTGGGACTCCTGAGTGGATGGCTCCAGAGGTTCTTCGTGATGAGCCGTCAAATGAGAAGTCAGATATTTACAGCTTTGGTGTAATCTTATGGGAGCTTGCAACATTGCAACAGCCATGGGTTAATTTAAATCCAGCACAGGTTGTGGCAGCTGTTGGTTTTAAGGGAAAAAGGCTTGAGATCCCACGTGATGTGAATCCCCAAGTAGCTGCCCTAATCGAGGGTTGCTGGGCTAATGAGCCTTGGAAACGACCTTCTTTTGCGAGTATTATGGATTCTTTGAGGCCATTGCTCAAACCCCCTACACCTCAACCTGGTCGTCCGAACATGATTTTATCGATCTTGATATCTAACAAGATTACACTATTTTTAGTTGTCCTAGAGTCAATTGTATATTTCTTTAATTCAGGTTTAAGAATACTGATTTCCGACCCAGAGCAAGGATACTCCATCTTTATTGTTCCGACAAAATTGTTTGATTAG 2643 0.4764 MPARRSNYSLLSQIPDDQFSGASAPSSSGDGKAGRAGKSDRFSEWDLIADHRAGQQGANRIGNLYSSVGLQRQSSGSSYGESSLSGGGDFYAPTLSTAAASDVDAFGYFHDERSKFSEAPARIAGSFGKSWAQQTEESYQLQLALALRLSSDATCADDPNFLDPMPDDGALRLSSSAEAVSHRFWVNGCLSYSDKIPDGFYLIHGMDSFVWTVCTDLHENGRIPSVDMLKSVNPTIVSSVEVVLVDQHSDPSLRDLQNRAHNISCSSITTSDVVDQLSKLVCNRMGGSAPVGEDNIVSIWRDCSNDLKDCLGSVVIPIGSLSVGLCRHRAILFKVLADAIDLPCRIAKGCKYCKRDDASSCLVRFGLEREYLVDLIGKPGHLSEPDSLLNGPSSISFSSPLRFPRLKPAEPTIDFRSLAKQYFSDCLSLELVFDNSSAEQFDGKYKDRNNPRPISTDNNRNSHLPLHPQDSHLSTREQFSETYIPSDAPQNIVDSTVGKYPPPIKHKRAVGVPTPLALTNTNDDMIEGKRFIEGSQLIPSKHTRELTLDMEDLDISWSDLVLREKIGSGSFGTVHRAEWNGSDVAVKILMEQDFHAERFQEFLREVSIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHRSGAKEVLDERRRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDRKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDIYSFGVILWELATLQQPWVNLNPAQVVAAVGFKGKRLEIPRDVNPQVAALIEGCWANEPWKRPSFASIMDSLRPLLKPPTPQPGRPNMILSILISNKITLFLVVLESIVYFFNSGLRILISDPEQGYSIFIVPTKLFD 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00606 880 MobiDBLite consensus disorder prediction 454 477 - -
Phco6g00606 880 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 134 817 - -
Phco6g00606 880 MobiDBLite consensus disorder prediction 1 38 - -
Phco6g00606 880 Gene3D Transferase(Phosphotransferase) domain 1 639 823 - -
Phco6g00606 880 SMART serkin_6 560 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00606 880 Pfam Ethylene-responsive protein kinase Le-CTR1 177 382 - -
Phco6g00606 880 MobiDBLite consensus disorder prediction 440 477 - -
Phco6g00606 880 SUPERFAMILY Protein kinase-like (PK-like) 539 813 IPR011009 -
Phco6g00606 880 FunFam Serine/threonine-protein kinase CTR1 639 824 - -
Phco6g00606 880 PRINTS Tyrosine kinase catalytic domain signature 634 647 IPR001245 GO:0004672|GO:0006468
Phco6g00606 880 PRINTS Tyrosine kinase catalytic domain signature 675 693 IPR001245 GO:0004672|GO:0006468
Phco6g00606 880 PRINTS Tyrosine kinase catalytic domain signature 722 732 IPR001245 GO:0004672|GO:0006468
Phco6g00606 880 PRINTS Tyrosine kinase catalytic domain signature 785 807 IPR001245 GO:0004672|GO:0006468
Phco6g00606 880 PRINTS Tyrosine kinase catalytic domain signature 741 763 IPR001245 GO:0004672|GO:0006468
Phco6g00606 880 CDD STKc_MAP3K-like 566 814 - -
Phco6g00606 880 FunFam Serine/threonine-protein kinase isoform 1 550 638 - -
Phco6g00606 880 ProSitePatterns Serine/Threonine protein kinases active-site signature. 681 693 IPR008271 GO:0004672|GO:0006468
Phco6g00606 880 ProSitePatterns Protein kinases ATP-binding region signature. 566 587 IPR017441 GO:0005524
Phco6g00606 880 MobiDBLite consensus disorder prediction 1 27 - -
Phco6g00606 880 Gene3D Phosphorylase Kinase; domain 1 553 638 - -
Phco6g00606 880 Pfam Protein tyrosine and serine/threonine kinase 561 814 IPR001245 GO:0004672|GO:0006468
Phco6g00606 880 ProSiteProfiles Protein kinase domain profile. 560 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00606 Phco-Chr6 5989892 5998425 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Phco6g00606 PK_Tyr_Ser-Thr 6.5e-71 CL0016