Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00596 ATGGCCTCTTGCGACGACGACGACGACTTCTCTCTCCTCCGTGACGATAACCACCACCTCCACCAACCTTACGCGCCGCACCACCACTTCTCCCCCTCCGCCGTCGCCGTCGCTCCTGTCCCACCCAAATCCGTCGCTGACGACGCTGAGGACTACGGAAACCCCTTCGACGACGATGGCGGCAGCGAGAAGCGCAAGGACCGCGAGGAGATCGGCGAGGGAGCCGCGTCGTACGGATTCAACAAGAGATCTAAGGCTCCGCCGTCGAGCACAGGCAGCGCCGAGTACCGGAAGGACAGGGAGGAGTGGAGCGACACAGCGATCGTGTGCCTCCTCGAGGCGTACACGGAGAAGTTCACACAGCTGAATCGGGGAAACCTGAGAGGAAGAGATTGGGAGGAGGTCGCGTTGGTGGTGAGCGGACGGTGCGAGAACCAATCGAAGAGCGTGGAACAGTGTAAGAACAAGGTCGATAACCTAAAGAAGAGGTACAAATTGGAGCGACATAGAATGAGCAGTGGCTGCATTTCCACCAGTCACTGGCCTTGGTTCAAGCAATTGGAGCAGATTGTTGGGAATTCTCTTCCGGCGAAATTCTCCGATGAGGATAAAGCGGTTGTTTCTGCCGGAACTTCGCCCAGACAATCGAAAAGATATGGAGTGGCAACACCCAGCACTGGAGGTCAAGCGAATAGCATGAGGTCAAAAGCACTGACAAACCTTAGATGGCGGAGGGTAGTCTTCAAAATTAGTGGAGCAGCTCTTACTGGATCTGATACCTGCAACATTGACCCTAAGGTGGCTATGTTAGTTTCAAGAGAAGTTGCCATAGCTTCCCGCCTTGGTGTTGAGGTGGCTATTGTTGTTGGAGGTCGTAATTTCTTCTCTGGAGATGCATGGGTAACTGCAACAGGTTTAGAAAGATGTACTGCATACCAAGTTGGTATGATGGCAACAGTGATGAATTCAATGTTGCTCCAATCAACTCTAGAGAAGATGGGTGTTCAGACTCGTGTACAAACTTCAATTGCCATGCAGGAGTTTGCTGAAACATACAATAGGCAGCGGGCCATCAGACATCTTGAGAAAGGAAGAGTTGTTATATTTGGTGGCATCAGTTTTGGTGCTGGCAATCCACTTTTCTCAACTGACATAGCTGCAGCTCTTCGTGCTTCAGAGCTTAATGCTGAAGCGGTCCTCAAGGGTACTAATGTAGATGGTGTATATGACTGCAACTCACGAGATAATAATTTCACTTTTGAGCACATATCCTTCAGAGAGCTGGGGTCAAGAGGAGTCACCTCTATGGATGCGTCTGCGCTGACATTCTGCAAGGGAAATGGCATTCCTGTCGTGGTTTTTAATCTACTGGAGCCTGGGAACATCTCTAAAGCTTTATGTGGAGAACAAGTTGGCACACTAATTGATGAAACTGGAGCAGTAAGCTAA 1449 0.5059 MASCDDDDDFSLLRDDNHHLHQPYAPHHHFSPSAVAVAPVPPKSVADDAEDYGNPFDDDGGSEKRKDREEIGEGAASYGFNKRSKAPPSSTGSAEYRKDREEWSDTAIVCLLEAYTEKFTQLNRGNLRGRDWEEVALVVSGRCENQSKSVEQCKNKVDNLKKRYKLERHRMSSGCISTSHWPWFKQLEQIVGNSLPAKFSDEDKAVVSAGTSPRQSKRYGVATPSTGGQANSMRSKALTNLRWRRVVFKISGAALTGSDTCNIDPKVAMLVSREVAIASRLGVEVAIVVGGRNFFSGDAWVTATGLERCTAYQVGMMATVMNSMLLQSTLEKMGVQTRVQTSIAMQEFAETYNRQRAIRHLEKGRVVIFGGISFGAGNPLFSTDIAAALRASELNAEAVLKGTNVDGVYDCNSRDNNFTFEHISFRELGSRGVTSMDASALTFCKGNGIPVVVFNLLEPGNISKALCGEQVGTLIDETGAVS 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00596 482 PANTHER URIDYLATE KINASE 96 481 - -
Phco6g00596 482 MobiDBLite consensus disorder prediction 57 73 - -
Phco6g00596 482 Gene3D - 234 481 IPR036393 -
Phco6g00596 482 Pfam Myb/SANT-like DNA-binding domain 100 190 IPR044822 -
Phco6g00596 482 Gene3D - 103 166 - -
Phco6g00596 482 MobiDBLite consensus disorder prediction 19 98 - -
Phco6g00596 482 MobiDBLite consensus disorder prediction 213 234 - -
Phco6g00596 482 Hamap Uridylate kinase [pyrH]. 241 476 IPR015963 GO:0005737|GO:0006221|GO:0033862
Phco6g00596 482 Pfam Amino acid kinase family 245 455 IPR001048 -
Phco6g00596 482 Coils Coil 143 170 - -
Phco6g00596 482 FunFam Uridylate kinase isoform A 235 481 - -
Phco6g00596 482 FunFam Aspartate/glutamate/uridylate kinase family protein 103 166 - -
Phco6g00596 482 SUPERFAMILY Carbamate kinase-like 242 475 IPR036393 -
Phco6g00596 482 CDD AAK_UMPK-PyrH-Ec 244 476 IPR015963 GO:0005737|GO:0006221|GO:0033862
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00596 Phco-Chr6 5864087 5868175 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phco6g00596 AA_kinase 1.9e-26 No_clan