Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00594 ATGGAACCCAATGGACTAGGCGCTGGAATGTTCTCTGGGATGGTAGGAGTGGATAACTCTTTGCAACCGCAGCAACAACAAAACCCTCACCACTTGCAACACCACCCCCAAATGGTTCCCTATGCTCCACACCATGACACTGATCCACATCATCCACACCATAATCAATCCATCAAACAAGGGTACCCTCCCTATTCTTCGGCCAAGACCAAGCAACAGCAACATAGTGGCCTCAGTGATGATGATGATGACACCTCGGACCCCAAGAGGAAGGTCTCGCTGTGGCAGAGAATGAAGTGGACTGACACCATGGTGAGGCTTTTGATAATGGCGGTTTATTACATTGGTGACGAGGGTGGCTCGGAAGGGACTGATAAGAAGAAGTCCTTGGGTATGTTGCAGAAGAAAGGGAAGTGGAAGTCGGTGTCGAGGGCTATGATGGAGAAAGGGTCCTATGTTTCTCCTCAACAGTGTGAGGATAAGTTCAATGACCTGAACAAGAGGTATAAGAGGGTGAATGATATTCTTGGCAAGGGAACTGCTTGCAGGGTTGTGGAGAATCAGAATTTGTTGGACACGATGGACTTGTCTCCAAAGATGAAAGAGGAGGTCAAGAAGTTGCTCAATTCCAAACATTTGTTCTTCAGGGAAATGTGTGCTTACCATAATAGTTGTGGCCATGGGAATAACAATGCTCCACAGCAAGGAGAGACTGGGGGGGAGGTGTCTCAGTCTCAGGCTCAACTACTTCAGCAGCAGCCTCAGCAACAACAGCAACAACAACCTTGTTTTCATTCATCAGAGGTGGGGAATTTGGGGGCTTCAGGGGTGGAGGGTTTGAGGATGCTGAAAGTGGGAAATGGGGAAGAGAATGATGATGATTCGGTTGAGGATGATGACTCTGAGGATGATTCGGATGAGGAGGAAGATGATTCAGGAGAAGGTGGTTCAAGGGGTAATGTGGGGCATGGACATGAAGATATGGAGGATGATAATGATGGAAGGTCAATCAGGAAGAGGGCAAGGAAAGTGAGGGGAGTTCCTGTGTCACCACTGATGATGCAGCAACTGAGTGCTGAGGTGAGTGCTGTGTTCCAAGATGGGGGTAGGAGTGCTTGGGACAAGAAACAATGGATGAGGAGCAGGATACTGCAGTTGGAGGAGCAGCAAATAAGCTATCAGAGTCAATCATTTGAGTTGGAGAAACAAAGGTTGAAATGGGCAAGGTTTAGCAGCAAGAAGGAGAGGGAAATGAAGAGAGCCAAACTTGAAAATGAACAAAGGAGGCTTGAGAATGAGAGAATGGTTTTGCTCATTCGACAGAAGGAGCTTGAACTGATGAGTCTTCAACACCAACAAAAGCATCAACATCAACAACAACAACAGCAACATTCTTCCACTTAG 1404 0.4722 MEPNGLGAGMFSGMVGVDNSLQPQQQQNPHHLQHHPQMVPYAPHHDTDPHHPHHNQSIKQGYPPYSSAKTKQQQHSGLSDDDDDTSDPKRKVSLWQRMKWTDTMVRLLIMAVYYIGDEGGSEGTDKKKSLGMLQKKGKWKSVSRAMMEKGSYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQNLLDTMDLSPKMKEEVKKLLNSKHLFFREMCAYHNSCGHGNNNAPQQGETGGEVSQSQAQLLQQQPQQQQQQQPCFHSSEVGNLGASGVEGLRMLKVGNGEENDDDSVEDDDSEDDSDEEEDDSGEGGSRGNVGHGHEDMEDDNDGRSIRKRARKVRGVPVSPLMMQQLSAEVSAVFQDGGRSAWDKKQWMRSRILQLEEQQISYQSQSFELEKQRLKWARFSSKKEREMKRAKLENEQRRLENERMVLLIRQKELELMSLQHQQKHQHQQQQQQHSST 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00594 467 MobiDBLite consensus disorder prediction 59 74 - -
Phco6g00594 467 MobiDBLite consensus disorder prediction 451 467 - -
Phco6g00594 467 MobiDBLite consensus disorder prediction 17 33 - -
Phco6g00594 467 MobiDBLite consensus disorder prediction 291 313 - -
Phco6g00594 467 MobiDBLite consensus disorder prediction 230 271 - -
Phco6g00594 467 MobiDBLite consensus disorder prediction 448 467 - -
Phco6g00594 467 Gene3D - 100 171 - -
Phco6g00594 467 MobiDBLite consensus disorder prediction 314 336 - -
Phco6g00594 467 MobiDBLite consensus disorder prediction 75 89 - -
Phco6g00594 467 PANTHER F16F4.11 PROTEIN-RELATED 10 450 - -
Phco6g00594 467 MobiDBLite consensus disorder prediction 286 336 - -
Phco6g00594 467 Pfam Myb/SANT-like DNA-binding domain 97 220 IPR044822 -
Phco6g00594 467 Coils Coil 411 440 - -
Phco6g00594 467 MobiDBLite consensus disorder prediction 1 89 - -
Phco6g00594 467 MobiDBLite consensus disorder prediction 230 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00594 Phco-Chr6 5848039 5849442 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phco6g00594 Myb_DNA-bind_4 3.4e-21 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00594 6 5848039 5849442 Phco6g00594 6 5848039 5849442 ECH
Phco2g02119 2 51967728 51969083 Phco6g00594 6 5848039 5849442 PCT