Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00590 ATGGGGGACAAGCACCATCTAGACGACAGCAGCGATTTCACCTCCGAGGACGAAGGCACCGAGGATTACCGCCGCGGTGGCTACCACGCTATCCGAATCGGCGACACCTTCAACGCCGGTAGCTACGTCGTTCAGTCTAAGCTCGGTTGGGGCCATTTCTCCACTGTCTGGCTCGCTTGGGACATCAAACATTCTAGATATGTGGCTTTGAAGGTTCAGAAGAGTGCTCAGCACTACACCGAGGCGGCCATGGATGAGATAACGATTTTACAACAGACTGCGGAGGGAGATCCTGACGATAAGAAATGTGTGGTGAAGCTTTTGGACCATTTCAAGCATTCTGGCCCCAATGGGCAGCATGTCTGCATGGTTTTTGAGTACCTTGGGGACAATCTTTTGACACTTATTAAGTACTCGGATTACCGCGGGTTGCCTATCGCCATGGTTAAGGAGATTTGCTTTCACATTCTGGTTGGATTGGATTACTTGCACAAACAGCTTTCCATCATACATACTGACTTGAAGCCTGAAAACATCCTGCTTTTGTCGATGATTGATCCATCTAAGGATCCTAGGAAGTCTGGGGCGCAGCTTATTCTTCCTAATAGTAAAGATAAGATGGTGCTGGAGTCAACAGGTGCGAAAGATACGAAGGTGTTGAATGGGGATTTGGTTAAGAATCACAAGAAGAAGATTAAGAGAAAAGCTAAACAAGCAGCCCATGGTTGTTTTGAGAAGGAAGCTTCTGAAGGAGTTGAGGGTAATCCTGAAACTTCTGGGGCTGTGGAGTGGTCTCCTAATACGAGTTCTGCAAGAGAACAGGCTGCCAGTTCTGCAGGAACTAGTAGGTTATCGGATGCTGATGCAGCAAAGTTGAAAGAGCAGGGTAACAAAAGAGGAAGCCGGTCAATGAGACAGAAGCTGCTGGCATCAGTTGATCTCAAGTGCAAGTTAGTGGACTTTGGTAATGCCTGCTGGACATATAAACAGTTTACTAATGATATCCAGACAAGACAGTATCGGTGCCCAGAGGTGATCCTTGGGTCAAAATATTCCACATCTGCAGATCTTTGGTCCTTTGCTTGCATTTGTTTTGAGCTTGCAACTGGAGATGTGTTATTTGATCCTCACAGTGGTGACAACTTTGATAGGGATGAGGACCACTTAGCATTAATGATGGAACTTCTTGGAATGATGCCACGTAAGATAGCACTAGGGGGGCGTTATTCCCGTGATTTCTTTAATAGATATGGTGATTTAAGGCACATCCGGCGATTGCGATTCTGGCCTTTGAATAAAGTCCTCATGGAGAAGTATGATTTCAGTGAGAAAGATGCAAATGATTTGACGGAATTTTTGGTTCCTATCCTTGATTTTGTTCCTGAAAAGCGGCCTACAGCTGGTCAGTGCCTTCTGCATCCTTGGATCAATATAGGTCCACGTCTTTTGGAGCCATCTGTGCCTTCTAATCACAACCCAGCTGCTGAAACTGCTGTTTTGGATCAGAAGAAAAGGGAAAAAGATGAGAGGGAGGCCATGGAGGCTGGAATGGGAAATATTGTTATCAATTCAGATTCTAAATCACTGATGCAATCACCATCAAAGAAAGCCTTCAAAGCCACCCAGCAGTAG 1632 0.4577 MGDKHHLDDSSDFTSEDEGTEDYRRGGYHAIRIGDTFNAGSYVVQSKLGWGHFSTVWLAWDIKHSRYVALKVQKSAQHYTEAAMDEITILQQTAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYSDYRGLPIAMVKEICFHILVGLDYLHKQLSIIHTDLKPENILLLSMIDPSKDPRKSGAQLILPNSKDKMVLESTGAKDTKVLNGDLVKNHKKKIKRKAKQAAHGCFEKEASEGVEGNPETSGAVEWSPNTSSAREQAASSAGTSRLSDADAAKLKEQGNKRGSRSMRQKLLASVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLNKVLMEKYDFSEKDANDLTEFLVPILDFVPEKRPTAGQCLLHPWINIGPRLLEPSVPSNHNPAAETAVLDQKKREKDEREAMEAGMGNIVINSDSKSLMQSPSKKAFKATQQ 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00590 543 FunFam Serine/threonine-protein kinase SRPK-like protein 306 476 - -
Phco6g00590 543 SUPERFAMILY Protein kinase-like (PK-like) 37 485 IPR011009 -
Phco6g00590 543 SMART serkin_6 42 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00590 543 MobiDBLite consensus disorder prediction 498 514 - -
Phco6g00590 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Phco6g00590 543 MobiDBLite consensus disorder prediction 243 304 - -
Phco6g00590 543 MobiDBLite consensus disorder prediction 1 21 - -
Phco6g00590 543 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 12 502 - -
Phco6g00590 543 FunFam CMGC/SRPK protein kinase 28 127 - -
Phco6g00590 543 MobiDBLite consensus disorder prediction 287 301 - -
Phco6g00590 543 MobiDBLite consensus disorder prediction 521 543 - -
Phco6g00590 543 ProSiteProfiles Protein kinase domain profile. 42 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00590 543 MobiDBLite consensus disorder prediction 487 543 - -
Phco6g00590 543 ProSitePatterns Protein kinases ATP-binding region signature. 48 71 IPR017441 GO:0005524
Phco6g00590 543 Gene3D Phosphorylase Kinase; domain 1 28 127 - -
Phco6g00590 543 CDD STKc_SRPK 31 476 - -
Phco6g00590 543 Gene3D Transferase(Phosphotransferase) domain 1 304 476 - -
Phco6g00590 543 Gene3D Transferase(Phosphotransferase) domain 1 96 186 - -
Phco6g00590 543 MobiDBLite consensus disorder prediction 260 284 - -
Phco6g00590 543 Pfam Protein kinase domain 309 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00590 543 Pfam Protein kinase domain 42 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00590 Phco-Chr6 5814150 5824180 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Phco6g00590 Pkinase 3.3e-19 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00590 6 5814150 5824180 Phco6g00590 6 5814150 5824180 ECH