Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00577 ATGGATTTGTTTCAGCAGGACACAATGTTGGTGCCTCCATGGTTTGAGCCACTCCTAACCACATCCTTCTTCAATGTGTGTCGCGTTCATGGAGATGCCGCCAGAAGCGAATGTAACATGTTTTGTTTGGATTGTAACGAGGATGCGTTTTGCTTTTATTGCCGATCCTCGCGACACAAAGATCACCGAGTGATTCAGATAAGGCGATCTTCGTATCACGATGTTGTGAGGGTGTCGGAAATTCAGAAAGTGTTGGACATTAGTGGAGTGCAAACCTATGTGATCAACAGTGCGAGAGTTTTGTTTCTGAACGAGAGGCCTCAACCGAAGTCAGGAAAAGGTGTTGCTCACATTTGTGAGATTTGTGGAAGAAGCCTCTTGGACCCATTTCGGTTCTGTTCTTTGGGGTGTAAGCTTGTGGGAATAAAGAGAAAGGGGGATTCTAAAAAGGAGACATCAACAATGGAGGGCATTGGCATGTCAAGGAGATTGGTTTGTTCAAGACATGAGCAAGAAGAAGAATTGCGTGAAGGCTCACAACAAGACATGTACCCGGCCACGCCTTCTCCACCTGCTTCAAACGCAAGGCGAAGAAAAGGCATTCCTCATAGGGCACCTTTTGGCTCCTAA 630 0.4635 MDLFQQDTMLVPPWFEPLLTTSFFNVCRVHGDAARSECNMFCLDCNEDAFCFYCRSSRHKDHRVIQIRRSSYHDVVRVSEIQKVLDISGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLVGIKRKGDSKKETSTMEGIGMSRRLVCSRHEQEEELREGSQQDMYPATPSPPASNARRRKGIPHRAPFGS 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00577 209 MobiDBLite consensus disorder prediction 168 209 - -
Phco6g00577 209 SUPERFAMILY B-box zinc-binding domain 25 69 - -
Phco6g00577 209 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 7 207 - -
Phco6g00577 209 Pfam PLATZ transcription factor 68 139 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00577 Phco-Chr6 5700277 5701509 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Phco6g00577 PLATZ 1e-29 No_clan