Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00501 ATGGGGAACACATGTACTGGTCCTAGCATTTCAAAAAATGGTTTGTTTCAATCAGTTTCTGCAGCAATTTGGCGGTCTCAATTGCCTGATGAATCAGTGTCTAATAAAGAATCTGTAAAAGAGGAAGCGACTAGTGTGCCCGAATCGCCTTTGCCTGTCCAAAATAAACCTCCCGAGCAGATAACTATGCCGAAACCTGAAGCCAAACAAGAGGCAAAATCAGAAACAGAACCAGCACAGGGACAAGAGAAGAAGAAGAACAAGAAACATGGTTCTGTGAAGAGAGTTTCTAGTGCAGGGCTTCGAGTTGACTCTGTGTTGCAAAGAGAGACTGATAATTTCAAGGAGTTCTTCACTCTTGGGAGAAAACTTGGACAGGGTCAGTTTGGGACAACTTTCTTGTGTGTGGAGAAGGCAACAGGAAATGAGTATGCCTGTAAATCTATTGCAAAGAGGAAGCTTGTCACAGATGATGATGTTGAGGATGTGAGAAGAGAAATTCAGATAATGCACCACTTGGCTGGGCATCCTAATGTTATATCCATCAAAGGTGCATATGAGGATGCTGTGGCTGTTCATGTTGTGATGGAATTGTGTGCAGGTGGAGAGCTTTTTGATAGGATTATTCAGCGTGGACATTATACTGAAAGACAGGCAGCTGAACTTACCAGGACTATAGTGGGGGTTGTGGAAGCTTGCCATTCTCTTGGTGTGATGCACAGAGACCTTAAACCTGAGAATTTTCTCTTTGTCAATCAGCTAGAAGATTCACTTCTAAAAACTATTGACTTTGGATTGTCTGTCTTCTTTAAGCCAGGTGATATCTTTTCTGATGTGGTGGGCAGCCCATACTATGTTGCCCCTGAAGTTTTGCGAAAGCGTTATGGTCCTGAGGCAGATGTGTGGAGTGCTGGTGTTATCCTTTACATTCTTTTGAGTGGAGTACCTCCATTTTGGGCTGAAAACGAACAAGGAATATTTGAACAGGTTCTGCGTGGTGATCTTGATTTTTCTTCTGACCCCTGGCCTAACATTTCTGAAAGTGCAAAAGATTTAGTACGAAAAATGCTTGTTCGTGACCCTAGAAGGAGGTTGACTGCACATCAAGTATTATGTCATCCTTGGATTCAAGTTGATGGTGTAGCTCCTGACAAGCCACTTGATTCTGCTGTATTAAGTCGCTTGAAGCAATTTTCTGCTATGAACAAGCTCAAGAAAATGGCTCTTATAATTATTGCTGAGAGCTTATCTGAAGAAGAAATTGCTGGCTTAAAAGAGATGTTCAAGATGATAGATGCAGACAACAGTGGTCAAATCACCTTTGAAGAACTTAAAGCTGGTTTGAAAAGAGTGGGTGCTAATCTTAATGAGTCTGAAATTTATGATCTAATGCAAGCGGCTGATATTGATAACAGTGGGACAATTGATTATGGCGAATTCCTCGCTGCAACATTACACCGCAACAAAATTGAAAGAGAAGACAATCTATTTGCAGCCTTTTCTTACTTTGATAAAGATGGAAGTGGCTATATTACTCAGGAAGAACTTCAACAGGCTTGTGATGAGTTTGGCATAAAAGATGTTCGTTTGGAAGAGATAATCAAGGAAATTGATGAAGATAATGATGGGCGCATAGATTACAATGAGTTTGTGGCTATGATGCAGAAAGGAAATCTTCCAGCGGTTGGTAAAAAGGGTTTAGAAAATAGCTTCAGTATTAAGTTCAGGGAGGCATTAAAATTGTAG 1746 0.4089 MGNTCTGPSISKNGLFQSVSAAIWRSQLPDESVSNKESVKEEATSVPESPLPVQNKPPEQITMPKPEAKQEAKSETEPAQGQEKKKNKKHGSVKRVSSAGLRVDSVLQRETDNFKEFFTLGRKLGQGQFGTTFLCVEKATGNEYACKSIAKRKLVTDDDVEDVRREIQIMHHLAGHPNVISIKGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERQAAELTRTIVGVVEACHSLGVMHRDLKPENFLFVNQLEDSLLKTIDFGLSVFFKPGDIFSDVVGSPYYVAPEVLRKRYGPEADVWSAGVILYILLSGVPPFWAENEQGIFEQVLRGDLDFSSDPWPNISESAKDLVRKMLVRDPRRRLTAHQVLCHPWIQVDGVAPDKPLDSAVLSRLKQFSAMNKLKKMALIIIAESLSEEEIAGLKEMFKMIDADNSGQITFEELKAGLKRVGANLNESEIYDLMQAADIDNSGTIDYGEFLAATLHRNKIEREDNLFAAFSYFDKDGSGYITQEELQQACDEFGIKDVRLEEIIKEIDEDNDGRIDYNEFVAMMQKGNLPAVGKKGLENSFSIKFREALKL 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00501 581 MobiDBLite consensus disorder prediction 27 96 - -
Phco6g00501 581 ProSiteProfiles EF-hand calcium-binding domain profile. 529 560 IPR002048 GO:0005509
Phco6g00501 581 ProSiteProfiles Protein kinase domain profile. 118 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00501 581 FunFam Calcium-dependent protein kinase 1 384 558 - -
Phco6g00501 581 Pfam Protein kinase domain 119 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00501 581 ProSitePatterns EF-hand calcium-binding domain. 504 516 IPR018247 -
Phco6g00501 581 Pfam EF-hand domain pair 436 486 IPR002048 GO:0005509
Phco6g00501 581 Gene3D Transferase(Phosphotransferase) domain 1 204 400 - -
Phco6g00501 581 Gene3D Phosphorylase Kinase; domain 1 120 203 - -
Phco6g00501 581 ProSitePatterns EF-hand calcium-binding domain. 432 444 IPR018247 -
Phco6g00501 581 PANTHER SERINE/THREONINE-PROTEIN KINASE 108 550 - -
Phco6g00501 581 CDD EFh 496 555 IPR002048 GO:0005509
Phco6g00501 581 FunFam Calcium-dependent protein kinase 1 120 203 - -
Phco6g00501 581 ProSitePatterns EF-hand calcium-binding domain. 538 550 IPR018247 -
Phco6g00501 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Phco6g00501 581 SUPERFAMILY EF-hand 416 556 IPR011992 -
Phco6g00501 581 ProSiteProfiles EF-hand calcium-binding domain profile. 419 454 IPR002048 GO:0005509
Phco6g00501 581 FunFam Calcium-dependent protein kinase SK5 204 388 - -
Phco6g00501 581 ProSitePatterns EF-hand calcium-binding domain. 468 480 IPR018247 -
Phco6g00501 581 ProSiteProfiles EF-hand calcium-binding domain profile. 455 490 IPR002048 GO:0005509
Phco6g00501 581 Gene3D - 401 560 - -
Phco6g00501 581 CDD STKc_CAMK 117 375 - -
Phco6g00501 581 MobiDBLite consensus disorder prediction 66 86 - -
Phco6g00501 581 ProSiteProfiles EF-hand calcium-binding domain profile. 491 526 IPR002048 GO:0005509
Phco6g00501 581 SMART efh_1 529 557 IPR002048 GO:0005509
Phco6g00501 581 SMART efh_1 495 523 IPR002048 GO:0005509
Phco6g00501 581 SMART efh_1 423 451 IPR002048 GO:0005509
Phco6g00501 581 SMART efh_1 459 487 IPR002048 GO:0005509
Phco6g00501 581 CDD EFh 424 483 IPR002048 GO:0005509
Phco6g00501 581 Pfam EF-hand domain pair 494 555 IPR002048 GO:0005509
Phco6g00501 581 SMART serkin_6 118 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00501 581 SUPERFAMILY Protein kinase-like (PK-like) 117 377 IPR011009 -
Phco6g00501 581 ProSitePatterns Protein kinases ATP-binding region signature. 124 151 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00501 Phco-Chr6 4824676 4830874 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phco6g00501 Pkinase 1.9e-73 CL0016