Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00495 ATGTTGATCATGCTTTTGTTGTTCTTCAACTTGCTGATCCAGCCTCGACTTGGTGCAAGCACTGTGGTTGACCCCAACACTTTCTCCTTTGTTACTTTCACTTCTGAGAGTTGCACCAATGGTGAGCTGCTTTGCATGGGTTCAGCCACTGCTGGCAATGGGTATTTGAGTCTCACCCCAGAGCCACAACAAAGCAGCAACTCAAGCTCAACACTGTCTAACACAACCAGACATGTTGGAAGGGTTTTGTACCCTCATCCTGTGCATGCTTGGCCTGCAATTATCTCCACCACATTCACTCTTAGGATCACTCCTTTTTCAGAAAATTCAACCGGCTCTGGGGATGGAGTGGCACTAGTGTTTGCTAATGATAACAGGCCCTCACCAAATGGCTCTTATCTTGGCATGTTTGATCAGTCTACTCCAGGTGGGGGTTTTCAACAACTAGCTGTGGAGATGGACACTTTCATGAATGAATTTGATCAAGATGGAAACCACATTGGGATAGTGACAACAAGCATCACAAATCCACTTGCATCTGAGAGTCTCAATAGCACTGGCATTGACCTCAAAAGTGGAAGAGACATTGAGGTCAAAGTTGACTATGATGGATGGAGTAAAATGATTTTTGTCTCTGTGGGATACCCTGAAAGCCAATTGAAGAATGTCCTTAACCATTCAATTAACCTACCTGACATACTTCCAAGCTCCATTTATGTTGGTTTCACATCCTCCACGGGCAACACTTTTCCTGAAAGCCACCAGGTCCTCAATTGGGTATTCACATCAGTGCCACTTCCTTTTCTTTCTGTTGAACACAGTAGAGTTGGCACCATCAAGACCTTATTGGTAATTGTCATGGTATGCTTATTTCCTTTTATTTGGATAGCTTTTTGGAGGAAAAGATATTTGAGGGGTAAAAAGAAGGGAGATATAGAAAGCCTATCAAAGAAGGCTGCAGATATCCCCAAGGTGTTCACTTACAAGCAACTATCAAGGGCAACATGCAACTTCAGCCAGGAAAATCTTTTGGGAAAAGGTGCATTTGGCAGTGTTTATAAAGGAATCATATCAGACTCTAGAAAAACTGTAGCAGTGAAGAAGATTTCAGCAACTTCCAAGCAAGGTGAAAGAGAGTTCTTAGCTGAAATATGTACTATAGGGCGTCTTAGGCACAAAAACTTAGTGAAGCTCCAAGGCTGGTGCATTGAAGGCAAGAATCTTCTCTTGGTTTATGAATACATGGAAAATGGAAGCCTTGATCACTTCATCGGCAAAGGCAGTCTGAACTGGCAAATGAGGCACAAGGTATTGACAGGATTGGCATCAGCATTACTTTACCTTCATGAAGAGTGTGGAAACCCTTTTGTTCACAGAGATGTTAAGCCTAACAATGTCATGTTGGACAATAATCACGATGCTCATTTAGGAGATTTCGGGCTAGCAAGACTACTCAAAAGTGAAGGTTCAGTGACCACAAATCTCAATGGAACTCTAGGATATTTGGCTCCAGAACTAAGCTTTACAGGGAGAGCTACACCTGAATCAGACGTGTATAGCTTTGGCATGGTAGTTCTCGAAGTCACATGTGGGAAAAGGTTAAACTGGATTAAGCAAGGGAACAGTTTTGTAGACTCTGTGTGGAATCTGCATGCAGAAAATGCATTGGTTGAGTGTGTTGACAAACGACTAGAGAACAAATTTGACGAGGAAGAAGCTAAAAGGGCATTGATTGTTGGATTGGCATGTTTGCATCCTGATTCCATGTTGAGGCCAAGGATGAGAAAAGTTGTGAACATTTTTCAGAACCCAAATGAACCTTTAATGCAGTTAGCAGGAGTGAGGCCAACAGGAGTTTATGTATCAGTTTCTTCAAGTACATCATCCTCCAACTCTGGCTCTAACACTGAGTTACAGCTTCAATCATCCACAACATCATCACATTCAAAATTCAACAGTTGGCAAATGACAAATGGCACCGAAAGTCCAAAACAGACAAAGTGCGTAAAACTGGTGACAGCAGTCTTCCGAGGTGACTTAGTTTTCCATTTCAACTGTTTTCGTGTTAGCAAAAGCAAGAAACCAAATCAAAATTCAGAAGAAGAATAA 2109 0.4211 MLIMLLLFFNLLIQPRLGASTVVDPNTFSFVTFTSESCTNGELLCMGSATAGNGYLSLTPEPQQSSNSSSTLSNTTRHVGRVLYPHPVHAWPAIISTTFTLRITPFSENSTGSGDGVALVFANDNRPSPNGSYLGMFDQSTPGGGFQQLAVEMDTFMNEFDQDGNHIGIVTTSITNPLASESLNSTGIDLKSGRDIEVKVDYDGWSKMIFVSVGYPESQLKNVLNHSINLPDILPSSIYVGFTSSTGNTFPESHQVLNWVFTSVPLPFLSVEHSRVGTIKTLLVIVMVCLFPFIWIAFWRKRYLRGKKKGDIESLSKKAADIPKVFTYKQLSRATCNFSQENLLGKGAFGSVYKGIISDSRKTVAVKKISATSKQGEREFLAEICTIGRLRHKNLVKLQGWCIEGKNLLLVYEYMENGSLDHFIGKGSLNWQMRHKVLTGLASALLYLHEECGNPFVHRDVKPNNVMLDNNHDAHLGDFGLARLLKSEGSVTTNLNGTLGYLAPELSFTGRATPESDVYSFGMVVLEVTCGKRLNWIKQGNSFVDSVWNLHAENALVECVDKRLENKFDEEEAKRALIVGLACLHPDSMLRPRMRKVVNIFQNPNEPLMQLAGVRPTGVYVSVSSSTSSSNSGSNTELQLQSSTTSSHSKFNSWQMTNGTESPKQTKCVKLVTAVFRGDLVFHFNCFRVSKSKKPNQNSEEE 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00495 702 Gene3D Phosphorylase Kinase; domain 1 323 414 - -
Phco6g00495 702 MobiDBLite consensus disorder prediction 625 662 - -
Phco6g00495 702 SUPERFAMILY Protein kinase-like (PK-like) 322 630 IPR011009 -
Phco6g00495 702 FunFam probable L-type lectin-domain containing receptor kinase S.5 415 609 - -
Phco6g00495 702 FunFam probable L-type lectin-domain containing receptor kinase S.5 323 414 - -
Phco6g00495 702 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 264 IPR013320 -
Phco6g00495 702 Gene3D Transferase(Phosphotransferase) domain 1 415 610 - -
Phco6g00495 702 PANTHER - 66 606 - -
Phco6g00495 702 CDD lectin_legume_LecRK_Arcelin_ConA 28 263 IPR001220 GO:0030246
Phco6g00495 702 ProSiteProfiles Protein kinase domain profile. 338 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00495 702 FunFam Putative L-type lectin-domain containing receptor kinase S.7 24 274 - -
Phco6g00495 702 Pfam Protein kinase domain 339 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00495 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Phco6g00495 702 Pfam Legume lectin domain 27 264 IPR001220 GO:0030246
Phco6g00495 702 ProSitePatterns Protein kinases ATP-binding region signature. 344 368 IPR017441 GO:0005524
Phco6g00495 702 SMART serkin_6 338 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00495 702 Gene3D - 24 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00495 Phco-Chr6 4754128 4760323 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phco6g00495 Pkinase 5.1e-50 CL0016