Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00449 ATGGCCGCCGCAGCGCCGCCTCCGGCCCCAACTCCGGCTCCGGAGCCCGTCACATCGTTACCGGAAACCACCCCTCTCTTCACGCGCATCCGCCTGGCCACCCCCTCCGACGTCCCCCACATCCACAAACTGATCCACCAGATGGCCGTCTTCGAACGCCTGACCCACCTCTTCTCCGCCACGGAGTCCTCCCTCGCGGCCACCCTTTTCTCCCCAACCGCCCAGCCCTTCCACTCCTTCACCATCTTCCTTCTAGAAGCTTCTCCCAACCCCTTCGCTGTTTCAACCTTGGACTCCAACCCCTTCTTCACACCCCTCACTAAGTTCGTGAATCTGAGCCTCCCCTTTGAGGACCCCGAGCGGGAGACGTTCAAGAGCATGGATAATGTTACGGTTGTGGGGTTTGTGTTGTTTTTCCCGAACTACTCTTCCTTTCTGGGGAAGCCGGGGTTTTACGTGGAGGACTTGTTCGTGAGGGAGTGTTACAGGAGAAAGGGGTTCGGGAGAATGCTGCTGTCGGCGGTGGCGAGACAGGCGGTGAAGATGGGGTACGGGAGGGTGGAGTGGGTGGTGCTCGATTGGAATGTGAATGCCATTAGGTTTTACGAAGAGATGGGTGCTGATGTCTTGAACGAGTGGAGGATTTGCAGGTTAACTGGGGAGGCTCTTCAGACTTATGGAGGTGCTGATTAG 693 0.5786 MAAAAPPPAPTPAPEPVTSLPETTPLFTRIRLATPSDVPHIHKLIHQMAVFERLTHLFSATESSLAATLFSPTAQPFHSFTIFLLEASPNPFAVSTLDSNPFFTPLTKFVNLSLPFEDPERETFKSMDNVTVVGFVLFFPNYSSFLGKPGFYVEDLFVRECYRRKGFGRMLLSAVARQAVKMGYGRVEWVVLDWNVNAIRFYEEMGADVLNEWRICRLTGEALQTYGGAD 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00449 230 FunFam probable acetyltransferase NATA1-like 28 229 - -
Phco6g00449 230 MobiDBLite consensus disorder prediction 1 20 - -
Phco6g00449 230 Gene3D - 28 229 - -
Phco6g00449 230 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 29 221 IPR016181 -
Phco6g00449 230 CDD NAT_SF 128 188 - -
Phco6g00449 230 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 82 221 IPR000182 GO:0016747
Phco6g00449 230 Pfam Acetyltransferase (GNAT) family 116 206 IPR000182 GO:0016747
Phco6g00449 230 MobiDBLite consensus disorder prediction 1 19 - -
Phco6g00449 230 PANTHER DIAMINE N-ACETYLTRANSFERASE 28 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00449 Phco-Chr6 4220088 4220780 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Phco6g00449 Acetyltransf_1 7.3e-16 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00449 6 4220088 4220780 Phco6g00449 6 4220088 4220780 ECH