Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00433 ATGAATGCTTCAAAGCCCTATAGGAAAAGGCATGAAGATTGCTCCCGTAGCACCTCGTCTGGCAAAGAATTGAAACGCTGGAAGGTGAACCGAACATTGGTGACATTTAGGAACTTGTTTGAGAAGCTAATGCATGAATACAAAGTGTACGAACCTGGGAATTCTAAGGTTAAGACAAAAGCTTTGATGGAGGCAGCAAGGACAATGAGAAGAGAACATCAATGGGAGAACACTCAAAAGTGCGTGGGGCATATACTAGGAATCGATGTCGGTGATGTCTTTCAGAACTGGGCTGAACTCAATGTCATTGGTCTCCATAGGCAATTTTGGAATGGGATTGATTATAAGGTAATGGACAACAGCTCATTGGCCACAAGCATTGTAGTAACGGATCGCTATGATAATGCTTGGAAATCCAATGGTACCTTGGTTTATGAAGGTCAAGGAGGAAATCCTAATGTTGGGAGAAATATTTCACTTATTGATCAAACATTGAAAGGGGGAAATTTGGCACTGAAAAATAGCATGCAAGCTAGAAGTCCCGTGAGAGTTATATTGAAAGTTTGTGGAAAGTTTGATGGTGAGTTCAGTAAAACTAGCAACAATTTTCATCACTCGTATGTGTATGATGGTTTGTATTTGGTGGATACAATGAAAATAGAAAGAGGGAAATATGGAAAGCTTGTGTTCAAGTTTGCACTAAATAGAATTTTAGTACAACCCCAAACTTGTGTTGCCCTTAAGGACCATGGCGAAAATTCAAGGCAACTTGCAAGTTTTACTCCTAGGAAGAAACACAAACCGAAAGGTTGTGTAGCTCAAAAGGAGGTTGTTCGCATTAAAGATCTTTCAAATGGTGGCGAGAAGTTTAGTGTTAGGGTGGTGACTTCAAGTGATTGTGTTCAGCTACCCACATCCTTTGATTATGTTGTAAATAACATTTACTCAAACAAGTTCAACCTGGCATTTCTTGGTGGCTGTGATTGTGCGGATGGGTGTGTTGACAAAGAAAGTTGTGTCTGCTTCAGGAAGAACGGTAGCAGAATGCCGAATGATTGCAATAAAAGACTTGCTTCTGACATGGAATCATCATTTATATATGAGTGTGGCCCATCTTGCAAGTGCTCCTCTTCTTGCATCAACCGAGGAACTCAGTATGGCGTTGATGTCCAACCACCGAGCACTGTGTTCTACTGA 1197 0.4094 MNASKPYRKRHEDCSRSTSSGKELKRWKVNRTLVTFRNLFEKLMHEYKVYEPGNSKVKTKALMEAARTMRREHQWENTQKCVGHILGIDVGDVFQNWAELNVIGLHRQFWNGIDYKVMDNSSLATSIVVTDRYDNAWKSNGTLVYEGQGGNPNVGRNISLIDQTLKGGNLALKNSMQARSPVRVILKVCGKFDGEFSKTSNNFHHSYVYDGLYLVDTMKIERGKYGKLVFKFALNRILVQPQTCVALKDHGENSRQLASFTPRKKHKPKGCVAQKEVVRIKDLSNGGEKFSVRVVTSSDCVQLPTSFDYVVNNIYSNKFNLAFLGGCDCADGCVDKESCVCFRKNGSRMPNDCNKRLASDMESSFIYECGPSCKCSSSCINRGTQYGVDVQPPSTVFY 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00433 398 Gene3D - 64 260 IPR036987 -
Phco6g00433 398 SMART G9a_1 78 240 IPR003105 -
Phco6g00433 398 SUPERFAMILY PUA domain-like 65 245 IPR015947 -
Phco6g00433 398 Pfam SAD/SRA domain 82 237 IPR003105 -
Phco6g00433 398 Gene3D SET domain 261 398 IPR046341 -
Phco6g00433 398 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 6 390 - -
Phco6g00433 398 Pfam Pre-SET motif 284 382 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Phco6g00433 398 MobiDBLite consensus disorder prediction 1 21 - -
Phco6g00433 398 SUPERFAMILY SET domain 272 388 IPR046341 -
Phco6g00433 398 ProSiteProfiles Pre-SET domain profile. 325 387 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Phco6g00433 398 SMART preset_2 280 374 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Phco6g00433 398 ProSiteProfiles YDG domain profile. 83 236 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00433 Phco-Chr6 4101136 4103046 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00433 6 4101136 4103046 Phco6g00433 6 4101136 4103046 ECH
Phco2g01891 2 49521104 49526210 Phco6g00433 6 4101136 4103046 PCT