Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00430 ATGGGCGTTGAGAACTACCACGTGATTGAACTCGTAGGCGAAGGTTCCTTCGGGAAGGTATACAAGGGAAGGCGCAAGCACACGGGGCAGACCGTTGCGATGAAATTCATAATGAAGCATGGGAAAACTGAGAAGGATATTCACAATTTAAGGCAGGAAATCGAGATCTTAAGAAAGTTGAAGCATGGAAATATTATTCAAATGCTTGATTCCTTTGAAAGCCCGCAAGAATTTTGTGTCGTTACAGAATTTGCACAAGGTGAGCTATTTGAGATTCTTGAGGATGATAAGTGCCTTCCGGAAGAGCAAGTTCAAGCAATTGCAAAGCAATTGGTAAAAGCTTTACATTATTTGCATTCCAATCGGATCATCCATCGCGATATGAAGCCCCAAAATATTCTGATTGGTGCTGGATCTGTTGTCAAGCTTTGTGATTTTGGGTTTGCACGTGCAATGTCAACAAATACAGTTGTTTTGCGTTCTATAAAAGGCACTCCGTTGTACATGGCTCCAGAGCTAGTACGTGAGCAACCATACAACCACACTGTAGATTTATGGTCTCTTGGTGTCATACTGTACGAGTTATTTGTTGGCCAACCACCATTTTACACAAATTCTGTATATGCTCTCATCAGACACATTGTGAAGGATCCTGTTAAATATCCTGATCGCATGAGTCCAAATTTCAAAAGCTTTTTAAAGGGATTGCTTAACAAGGCACCGGAAAGTCGACTAACTTGGCCGGCTCTTCTTGAGCACCCATTTGTTAAAGAAGCCTCTGATGATCTTGAGGCCAGGGAATTGCGAGAGATAAATGGTTCACGCATGCGCAATGGTGCAGAACGGATGGTTGAAGGGAAAACCATTCAGACTCCAACAGGCAAAAACAATCACATGGTAGGTGTGGAGGGGCATATTGCTTCACCGCTTCAGAGTGAAGCTCAGTTAAATGGTCCTAACTTAGACAGAACTAATTCTTCAGTGCTTGATGAGTCCCCGGGATTTTCAGATCAAAATATAGGAGAGACAGGCTGCCAAAGATTGGACAGACTTGAAAATAACTCTCGCACAGTTAAAAGTGCAAAAATAATTGGTCAAGATAATGAAGCGTTGGGACATATTTTGCTACCACTGAAGAAGTGGTCAAAAGGATCTCAAAATATTTGCAGTGATCAAGATGTTCCTCAATCAAATCAGTCATTGAGGATTCTCTCGAACCTAGTTGCAGCTGGTGCCTTCAATTCTAGTGGACGAATAGATGAACTAATAAGAGATCTCCTTGTGTTTACTGGATCTGTTATAGCCATTAAGTCTTCTGAAGTTATTGACATGATGGCAAAGGGTTTCTCCATAACTAAGATTTTGCTAGATAATGGAGGAAGTTGCCCATCAAGCTCTTATTTAAGTCACTGGGTTGAATTTGTTGATATCTATTCTCAGGTTGTAGCATCAAATAATGATGCATCTGGAAGAGTTCTCTATGAATCAAGTGCCTGCATTACGGTCATGCTGTCTAGAGTTGCTCAAGGGGTTAAGTCATCTTCTCAAATTTCAGGCCAAGAGACACTGACTGAAACAGCTAGCAGAATTTTAGACCACGCAAAAACAATTGGTTTAGTGGACCATCTATGTCTGTGTTTAGCCACTTCAGGTTCCAGTCTTATTTCAGGTTCTTCCAACATGCTAAGGGCTGCTTCTGAAGCATGCAGAGCTATCTGGTCTTTGATTAATGCACTGGATATTCTTTTTATGAAAAAAAGTGCCATTTTGTTTCCCATTAATGCTTTGCGCAGTCATTCTCTGCATAGGATGGAAGTTGTACAACATGAGCAAAATCTCTTGGACAAAGCAGATTCAACTAAAATTGTTGATGCAATGACAAGAGCATTCCTTAGATCTAAAGCTGTTCAGGTTGCTTTTTACTATTGTTTTCACCAACGACTTGAGTCTGCAATGAGTTGTTGTCTTCAGCTTTTGTCTAGGTGCTGCCTACATAATGAACTTGTTCCAGCTCTTCTTTGTGGCCTTCCCAGTTCCCTTCCGGTGACTACTGTTGTTAGTGGGGGTGGTGATGGAACTATTGTTTCAGAAGTTTTCACTGTTTTATCATTATGCGGTTCCTCTGTTAACAAAGACGCACAGAGTATAGAACCAAGTAATGTAAAGTGCAAACTAACAAATCCTTCTGCTCTAGTTCGTCATTCATGCCTTGTTCTCGCAATAATTGCTCAGTGTTTGAAGTCAACTGGAAGAAATTCAGCAATGTTTATGCTCACTACCGCACCAAAGAAGCAGCATGCTCGACTTACAGTGCTTTCGCATCATATTACTTCTGATGATAAAATAAAAACCTCTATCGAACCTCAAAGTGCATCGGCCATATTGGCTTTGGCATCCATTCTATCTCTCGAATCTGGGGCTTTAGTTGAGTCTCCAATATCTGAAATTGCAATGCCTTTAATTCCTCGAACCTCTACACTAAGTGATCATCTTAAATTTTCATCTGGCAATGAAAATGAATTGGATCCTTGCAACTTCAGTGGGAAACTCTCATATTGGCAAGGGGTAAGAGATGGGTATGTTGGTCTTTTAGATTCCAGACTCAAGTGGGGAGGACCATTAGCTGTTCAGCAGTTGTGTGCAAGTGGCACTCCTCTACTTCTTATGGGCTTATTAGGAAATGATGTTTTTAATGCTTCGCATGGAAATGACCATCTAAATGATAGAGTTGGATTGTCTCCTATTGGTGTTGTATGGACAATTTCATTATTATGCCATTGTCTTTCTGGCGGTGCTTTGATATATCGTCAAATTTTGATTAGGAATGAACATATTAAGCTCATTTCCAACTTGATATGTGATGTTCATATCAAGTTGGTGAAATGCTGGATCGGACCTGGTGGAGGGAGAGCAGGAGTCAGAGATCTAATAAATGCTGTGATAGATATTTTAGCATTTCCTTTTGTTGCTCTGCAAAATGCACCTGGCTTGCCTTCCGCCACTGCTTCTGTCAACAGTGGGTTTCTTCTTAATATGGGATCCTCTGGTCAGAGAGTATGCATGGAAGATAAGGGTATAATTAAGGCAATTGAAGAAGACATGGGAAAATATATTAAGATACTTGCAGAGGTTGGTGTGCCTGGTATCATCCTTCGGTGTGTAGATTATATGGATTTGAATGATTTGGGCAGGCCTATTGCATTTCTGGCTAAGATGGTCTGCCACCGACCTTTGGCAATCCAACTCGTGAGTAAAGGTCTTTTGGATCCAAATAGGATGAGAAAGTTGTTTGACTGTTCGGGCCCAAAAGAGGTCACACTGGATGCCCTTATGATTATTTCCGATCTTGCTCGCATGGACAAGGGATTCTATGAGTACATTAAAGGTGCTACTATTTTGGAGTTCTTGAAAGATTTTCTTTCGCACGAGGATCCCAATATGCGTGCCAAAGCTTGCAGTGCTCTTGGAAACATGTGTCGTCATAGCGCCTATTTTTATAGTTCACTTGTTAGACATCAAATTGTTGGTATCCTTATCGAAAGATGTTCTGATCCAGACAAACGAACACGAAAGTTTGCTTGTTTTGCTATTGGAAATGCGGCTTACCACAATGACTTGTTGTATGAGGAGCTGAGGAGATCGATTCCTCATTTAGCAAATTTGTTACAAATAGCCGAGGAAGATAAGACTAAGGCTAATGCGGCAGGTGCACTTAGTAATCTGGTTCGTAACTCTGACAAACTTTGTGAAGACATCGTGTCTAAAGGAGCGGTTCAGTCTCTGCTGAAATTAATATCCGATTGTGCGGTATCAGCACTAAATCCAGGCAGAAATGATTCAGGAAACGAATCTCCGCTTAAGATCGCTCTCTTTTCCCTGGCAAAGATGTGTGCACATCCACTCTGCAGACAGTTCATCCGTTCATCGCCATTGTTCCCTGTGATTGGAAGGCTTAAGCAGTCTCCAGAATCATCCATAGCCAAATACGCGTCCGTGATCATTAGTAAAGTTGCTGAACCTTGA 4023 0.4129 MGVENYHVIELVGEGSFGKVYKGRRKHTGQTVAMKFIMKHGKTEKDIHNLRQEIEILRKLKHGNIIQMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQAIAKQLVKALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSTNTVVLRSIKGTPLYMAPELVREQPYNHTVDLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDRMSPNFKSFLKGLLNKAPESRLTWPALLEHPFVKEASDDLEARELREINGSRMRNGAERMVEGKTIQTPTGKNNHMVGVEGHIASPLQSEAQLNGPNLDRTNSSVLDESPGFSDQNIGETGCQRLDRLENNSRTVKSAKIIGQDNEALGHILLPLKKWSKGSQNICSDQDVPQSNQSLRILSNLVAAGAFNSSGRIDELIRDLLVFTGSVIAIKSSEVIDMMAKGFSITKILLDNGGSCPSSSYLSHWVEFVDIYSQVVASNNDASGRVLYESSACITVMLSRVAQGVKSSSQISGQETLTETASRILDHAKTIGLVDHLCLCLATSGSSLISGSSNMLRAASEACRAIWSLINALDILFMKKSAILFPINALRSHSLHRMEVVQHEQNLLDKADSTKIVDAMTRAFLRSKAVQVAFYYCFHQRLESAMSCCLQLLSRCCLHNELVPALLCGLPSSLPVTTVVSGGGDGTIVSEVFTVLSLCGSSVNKDAQSIEPSNVKCKLTNPSALVRHSCLVLAIIAQCLKSTGRNSAMFMLTTAPKKQHARLTVLSHHITSDDKIKTSIEPQSASAILALASILSLESGALVESPISEIAMPLIPRTSTLSDHLKFSSGNENELDPCNFSGKLSYWQGVRDGYVGLLDSRLKWGGPLAVQQLCASGTPLLLMGLLGNDVFNASHGNDHLNDRVGLSPIGVVWTISLLCHCLSGGALIYRQILIRNEHIKLISNLICDVHIKLVKCWIGPGGGRAGVRDLINAVIDILAFPFVALQNAPGLPSATASVNSGFLLNMGSSGQRVCMEDKGIIKAIEEDMGKYIKILAEVGVPGIILRCVDYMDLNDLGRPIAFLAKMVCHRPLAIQLVSKGLLDPNRMRKLFDCSGPKEVTLDALMIISDLARMDKGFYEYIKGATILEFLKDFLSHEDPNMRAKACSALGNMCRHSAYFYSSLVRHQIVGILIERCSDPDKRTRKFACFAIGNAAYHNDLLYEELRRSIPHLANLLQIAEEDKTKANAAGALSNLVRNSDKLCEDIVSKGAVQSLLKLISDCAVSALNPGRNDSGNESPLKIALFSLAKMCAHPLCRQFIRSSPLFPVIGRLKQSPESSIAKYASVIISKVAEP 1340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00430 1340 SMART arm_5 1204 1243 IPR000225 GO:0005515
Phco6g00430 1340 SMART arm_5 1244 1298 IPR000225 GO:0005515
Phco6g00430 1340 SMART arm_5 1120 1160 IPR000225 GO:0005515
Phco6g00430 1340 FunFam Aurora kinase A 1 88 - -
Phco6g00430 1340 Pfam Protein kinase domain 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00430 1340 PANTHER PROTEIN KINASE RELATED 3 1337 - -
Phco6g00430 1340 SUPERFAMILY Protein kinase-like (PK-like) 4 257 IPR011009 -
Phco6g00430 1340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Phco6g00430 1340 ProSiteProfiles Protein kinase domain profile. 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00430 1340 Coils Coil 1208 1228 - -
Phco6g00430 1340 ProSitePatterns Protein kinases ATP-binding region signature. 12 39 IPR017441 GO:0005524
Phco6g00430 1340 SMART serkin_6 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00430 1340 Pfam HEAT repeats 1134 1238 - -
Phco6g00430 1340 Coils Coil 40 60 - -
Phco6g00430 1340 FunFam Serine/threonine-protein kinase TIO 1067 1336 - -
Phco6g00430 1340 FunFam Serine/threonine-protein kinase 36 3 315 - -
Phco6g00430 1340 Gene3D - 1068 1337 IPR011989 -
Phco6g00430 1340 CDD STKc_STK36 4 256 - -
Phco6g00430 1340 Gene3D Transferase(Phosphotransferase) domain 1 2 304 - -
Phco6g00430 1340 SUPERFAMILY ARM repeat 1033 1337 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00430 Phco-Chr6 4049332 4062673 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_Fused Phco6g00430 Pkinase 4.7e-78 CL0016