Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00423 ATGGCAGAGTGGAAGAATTTGAGAGTTTTAGGGAAAGGTACATATGGTATGGTGTATCTTGCTAGTGTGATTCTTCCAAAAGAACACAAGTGGAGGGTTGTAGCAGTGAAAACTTCAAATTCTTTTTCTTTTTCCTTTGATTCACTCCAGAAGGAGAAAAAGATATTGGAGTTATTCATAGGTTGTGAAGAGATTCTCCAATATTATTTTTATCAGTACAGTATGGAGGCAAGTTCTGTGATCTACAATCTTTTTATGGAGTTTGCTCCTTATGGTTCTCTTGGTGATTTGATAAGAAAGGAGGCACTGCCAGAGAAGGAAGTGATCATCTATACTCACATGCTTCTCAAGGGACTTTGCTGTATTCACAAAGAAGGAGTTGTTCACTGTGATCTCAAACCAGACAACATTCTTCTCTTTCCTTCATCTGATGCTCATGCAAAGTATCAACTGAAGATTGCTGATTTTGGATTGTCCAAAACTAGAGAAGAGACAAATGCTGACTTGGGGGAGATCAGATTCAGAGGCACACCCTTCTACATGTCACCTGAATCGGTTGTAGGTCTTATGGAATCACCCTTAGATATATGGTCTCTTGGGTGTATTGTGATTGAGATGATCACTGGATTCCCAGCATGGTGTAATATACAAAGCCAGCAAGAGCTAATGTGGAAGCTTGGATTCCTTCAAGAGGCACCAAAGATACCTGATGAACTTAATTGGGATTGCAAGAACTTCTTGAGCAAGTGTTTTGTGAAGGACCCTAAGGAGAGATGGACAGCCAACATGCTTCTTGATCATCCTTTCATACAAAAGGAATATCCAACATCATCTGTGTCTAATCCTTCATCTTTTTTCTCATATGATATTGTTAGCTTTGTATCACATATGGGATAG 897 0.3924 MAEWKNLRVLGKGTYGMVYLASVILPKEHKWRVVAVKTSNSFSFSFDSLQKEKKILELFIGCEEILQYYFYQYSMEASSVIYNLFMEFAPYGSLGDLIRKEALPEKEVIIYTHMLLKGLCCIHKEGVVHCDLKPDNILLFPSSDAHAKYQLKIADFGLSKTREETNADLGEIRFRGTPFYMSPESVVGLMESPLDIWSLGCIVIEMITGFPAWCNIQSQQELMWKLGFLQEAPKIPDELNWDCKNFLSKCFVKDPKERWTANMLLDHPFIQKEYPTSSVSNPSSFFSYDIVSFVSHMG 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00423 298 ProSitePatterns Protein kinases ATP-binding region signature. 10 37 IPR017441 GO:0005524
Phco6g00423 298 ProSiteProfiles Protein kinase domain profile. 4 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00423 298 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Phco6g00423 298 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 275 - -
Phco6g00423 298 Pfam Protein kinase domain 5 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00423 298 Gene3D Transferase(Phosphotransferase) domain 1 1 292 - -
Phco6g00423 298 SUPERFAMILY Protein kinase-like (PK-like) 3 288 IPR011009 -
Phco6g00423 298 SMART serkin_6 4 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00423 Phco-Chr6 3974126 3975022 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phco6g00423 Pkinase 7.7e-48 CL0016