Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00392 ATGGAGTTACCTTCACCAGAGGAACTCATGCCTTTATCGCAAACCCTAATAACCCCTCATCTTGCCATAGCCTTTCACATAACAAACCCTTCCCACAATCACCACCAACAACAATATTATTCTTCACAAGAAACACCGCAATTTCCACATCAACCACCTTCCGCCACGGAGGAGGAACCGGCGCGGACACTCAAGCGGCCGCGGCTGGTGTGGACCCCACAGCTGCACAAGCGCTTCGTGGATGCCGTGGCTCACTTGGGGATCAAGAACGCCGTTCCCAAGACCATAATGCAGCTCATGAGCGTTGACGGCTTGACCCGCGAAAACGTCGCCAGCCACCTCCAGAAATACCGCCTCTACTTGAAGCGCATGCAGGGCTTGGCCGGAGGTTCCGCCGCCGACTCCGCCACTGACCACCTCTTCGCCAGCTCGCCTGTGCCGCCGCACTTTCTGCAAACCACTGCCCGTTCCACCTCGGACCACTACCTGCCCTTTGTGCCGGCGTTGCAGCAGCACCGCCACCACCAGCAGATGGTGGTGGCCGCACATTTTGGTTCGCCGCGGAATGCGCATTTAGAACTCCCCATTCTGTCGAGGATTGGCGCTTCAGTGCCGGGTTACGTGGAGGACGTGGAGTCAGGAGGGAGGAAGGTTCTTACTTTGTTTCCACCTGGAGATGATTGA 684 0.5716 MELPSPEELMPLSQTLITPHLAIAFHITNPSHNHHQQQYYSSQETPQFPHQPPSATEEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLAGGSAADSATDHLFASSPVPPHFLQTTARSTSDHYLPFVPALQQHRHHQQMVVAAHFGSPRNAHLELPILSRIGASVPGYVEDVESGGRKVLTLFPPGDD 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00392 227 SUPERFAMILY Homeodomain-like 63 123 IPR009057 -
Phco6g00392 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 122 IPR017930 -
Phco6g00392 227 MobiDBLite consensus disorder prediction 32 65 - -
Phco6g00392 227 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 178 IPR044841 GO:0003700|GO:0006355
Phco6g00392 227 FunFam Two-component response regulator 62 125 - -
Phco6g00392 227 NCBIfam myb-like DNA-binding domain, SHAQKYF class 67 119 IPR006447 GO:0003677
Phco6g00392 227 Gene3D - 63 125 - -
Phco6g00392 227 MobiDBLite consensus disorder prediction 32 52 - -
Phco6g00392 227 Pfam Myb-like DNA-binding domain 70 118 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00392 Phco-Chr6 3719407 3720090 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phco6g00392 Myb_DNA-binding 1.4e-08 CL0123