Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00390 ATGGGAATAGAGATTGTGGAGCCTAACACATGCATCAGGGGTTGCTGCACCAGCTCCTCTATTCCCCTTCATCTACCTCCGGCTTCTTATACTCTCCTCTCTCCTATTGCCAGAGGGGCTGAGAGTGTTGTTCATGAAGGGACTTTGGATGGCATGAGGGTTGCTGTGAAGAAACCCATCTTGTCAACATCAGAAGACATTAACAAGTTTCATAAAGAATTGCAATTGCTGTGCAAGTTAGATCACCCGGGAATAGCGAAATTGATTGCGGCCCATGCAAAACCGCCCAATTATATGTTTTTCTTCAAGTTATATGAATCTCCGAATCTTGCACAGAAGTTACATGTAGAAGAGTGGATACCAACTCTCAATGTTGCACTTATGATGGCAATGCAATTAGCAAAGGCTTTGCAATATCTGCATAACCTCGGGATTGTGCATAGAGATGTGAAACCGGCAAATATTCTTCTCGACAAAGATCTTTGTCCACACCTCACAGATTTTGGTTTGGCAGAATACAAGAATGATCTTAAGGGGGTTTCTATTCAGAATTGGAAGGCTTCTGGAAAGCCTACTGGTGGTTTCCACAAAAAGAATATGGTTGGAACACTCATTTACATGGCACCTGAAATATTAAGAAAGGAGTTACATACAGAAAAATCTGATGTATACAGTTTTGGGATATTGATCAATGAGCTCCTTACTGGTGTTGTGCCATATACAGATCTCCGTACAGAAGCTCAGGCTCACACAGTGCTTGAGATTAATTATACGGAGCAGCAACTAACAGCAGCAGTTGTTTCCTATGGATTACGACCAGTACTTGCTACTGAGGACTTGGGTATACCATCAAGATTATTATCAATGATAAGCAAATGCTGGGATGCAAATCCTAATAACAGACCCACTTTTGATGATATTGTCAAGGAACTTAATTTGATTACAGAGCACTGCAAGTTAAAGAAGGCAGAAGATATTTATATCAGACCTTTTAATACGTATGTTGATCAACCTGTGGACAAGACTGATTACCTTCAGGCTTATCAAGAGAGTTTTAGTTGGTCCACTCGTGGTGAACTTTTGGCTAGGACTGCCTCTGGTGCAAATGATTCTAGTTTGATAACTAGGTGTGAGTTTTATGACAAGCCTTCTGTATACCACCCAATACTGTCTTGGGGATCTTATGCTACCTGTGGGAGAAGGGAGACTATGGAGGATACACATTTCATTCTGCCCCATATTTGGGATGAAAAGGATGTCTATGCTTTTGGTATCTTTGATGGCCATAGGGGTGCAGCAGCTGCTGAGTTTTCTTTTAGAGCTGTACCAGCTGTTTTGCAGACTTTAGGTTTTATGGGCAGTCCTGCTAATGCACTAGTGGAAGCATTCATTAGGACAGATGCTGCCTTCAGAAAAGAGCTTGATTCTTATCGCAAATCCAACAGATGTATCCAGAAGGATTGGCATCCTGGGTGTACAGCAATTGCTGCTCTTATAGTCAGAAACAAGCTATTTGTTGCTAACATTGGTGATTGCAGGGCAATCATATGTCGTGCTGGTAATCCAATTTCTTTAAGTAAGGATCACGTTGCAAGCTGTCTTCAAGAGAGAGAACGTGTTATTCGTCAAGGGGGCCATGTACATTGGCAAGTTGACACTTGGAGGGTTGGTCTTCCTGCACTTCAGGTTACACGTTCTATTGGTGATGATGATCTGAAGCCTGCTGTCACTGCAGAACCTGAGATAACTGAGAGTACCTTGTGCCCAGATGATGAGTTTCTGGTCATGGCTAGCGATGGCTTGTGGGATGTGATAAGCAATGCAGAGGTCATAAATATCATAAAAGACACTGTTAAAGAGCCTGCAATGTGTTCTAAGAGGTTGGCTACTGAAGCAGTGGAACGTGGCAGCAAAGATAACATCACAGTTATTGTTGTTTTCTTACGTCCTGTGTCCACAGCAGAGAGAATTTATTAG 1977 0.4224 MGIEIVEPNTCIRGCCTSSSIPLHLPPASYTLLSPIARGAESVVHEGTLDGMRVAVKKPILSTSEDINKFHKELQLLCKLDHPGIAKLIAAHAKPPNYMFFFKLYESPNLAQKLHVEEWIPTLNVALMMAMQLAKALQYLHNLGIVHRDVKPANILLDKDLCPHLTDFGLAEYKNDLKGVSIQNWKASGKPTGGFHKKNMVGTLIYMAPEILRKELHTEKSDVYSFGILINELLTGVVPYTDLRTEAQAHTVLEINYTEQQLTAAVVSYGLRPVLATEDLGIPSRLLSMISKCWDANPNNRPTFDDIVKELNLITEHCKLKKAEDIYIRPFNTYVDQPVDKTDYLQAYQESFSWSTRGELLARTASGANDSSLITRCEFYDKPSVYHPILSWGSYATCGRRETMEDTHFILPHIWDEKDVYAFGIFDGHRGAAAAEFSFRAVPAVLQTLGFMGSPANALVEAFIRTDAAFRKELDSYRKSNRCIQKDWHPGCTAIAALIVRNKLFVANIGDCRAIICRAGNPISLSKDHVASCLQERERVIRQGGHVHWQVDTWRVGLPALQVTRSIGDDDLKPAVTAEPEITESTLCPDDEFLVMASDGLWDVISNAEVINIIKDTVKEPAMCSKRLATEAVERGSKDNITVIVVFLRPVSTAERIY 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00390 658 FunFam Leucine rich repeat protein phosphatase 2c domain containing protein 382 652 - -
Phco6g00390 658 SMART PP2C_4 381 646 IPR001932 -
Phco6g00390 658 Gene3D Transferase(Phosphotransferase) domain 1 22 337 - -
Phco6g00390 658 ProSiteProfiles PPM-type phosphatase domain profile. 391 648 IPR001932 -
Phco6g00390 658 FunFam Protein kinase and PP2C-like domain-containing protein 20 344 - -
Phco6g00390 658 SMART PP2C_SIG_2 395 648 IPR001932 -
Phco6g00390 658 ProSiteProfiles Protein kinase domain profile. 30 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00390 658 CDD PP2Cc 393 648 IPR001932 -
Phco6g00390 658 SMART serkin_6 30 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00390 658 SUPERFAMILY PP2C-like 383 650 IPR036457 -
Phco6g00390 658 Pfam Protein phosphatase 2C 396 641 IPR001932 -
Phco6g00390 658 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 25 312 - -
Phco6g00390 658 SUPERFAMILY Protein kinase-like (PK-like) 23 336 IPR011009 -
Phco6g00390 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Phco6g00390 658 Gene3D - 384 653 IPR036457 -
Phco6g00390 658 Pfam Protein kinase domain 31 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00390 Phco-Chr6 3700852 3709685 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Phco6g00390 Pkinase 1.8e-44 CL0016