Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00389 ATGTCAGATGAAGTGTTTGTTGGTGGTGTTGAGAGTAGAAAGTTGAAGCGTAAGATTGAGGAGCTATCATCCACTGATCATGTTGATTCAGAGTTCTCATTATCTTTGAGTCTTGGCAATACAAAAATGGTGGCTGAATCATCACCATCTACTTTCTTTGGTAAATCATTGAAAAACCATAAGAAGACACCAAATTTTGCTTCAAATCCCTTAGAAAACAGTAATCATGAAGTTATTGTGCCTAAGCAATTCAAATTCTCTTGCATGTTTTGCAATAAGAAATTTTCAAGCCCTCAAGCTCTTGGAGGACACCAAAATGCTCATAGGCCTGAAAGAGGGGTCTTAAGGATGGAGAAAGATATGAGAACTTTTGGACATGGCAATCACATGTTCCCACACTCATCCATTCCACATCACTATCCCTTTCATGGCTCAATACCCCTTTATTCTAGGCATAACATGCACCCCACCATGACTCATTTCTCAACCATGCCATGGCCTCATTTTGCACCTACCTTTGGCAACCAAGAGTTTCATGACAGATGCATCAGAAGGCAGCAATTTGGGATGAACAACCCTTGGGGAATAGTATCCCAAACTCCAAAAAATTTGTATAGCAGGGATGTGGAATTTGGTTTTAAGCATAACTAA 651 0.3978 MSDEVFVGGVESRKLKRKIEELSSTDHVDSEFSLSLSLGNTKMVAESSPSTFFGKSLKNHKKTPNFASNPLENSNHEVIVPKQFKFSCMFCNKKFSSPQALGGHQNAHRPERGVLRMEKDMRTFGHGNHMFPHSSIPHHYPFHGSIPLYSRHNMHPTMTHFSTMPWPHFAPTFGNQEFHDRCIRRQQFGMNNPWGIVSQTPKNLYSRDVEFGFKHN 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00389 216 ProSitePatterns Zinc finger C2H2 type domain signature. 88 108 IPR013087 -
Phco6g00389 216 Gene3D Classic Zinc Finger 65 126 - -
Phco6g00389 216 SUPERFAMILY beta-beta-alpha zinc fingers 85 112 IPR036236 -
Phco6g00389 216 ProSiteProfiles Zinc finger C2H2 type domain profile. 86 113 IPR013087 -
Phco6g00389 216 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 24 181 IPR044246 GO:0009788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00389 Phco-Chr6 3699230 3699880 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco6g00389 None None None