Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00383 ATGTCTGATGAATTCTTTGGTAGGGGTGATGAGAGTAGAAAACTCAAACGTAAGATCGAAGAGGCATCTTCTGCTGAAGTTGTAGATTCAGAGTTGTTACTATCCATGAGTCTTGGCAACAACAAAATGGTTGGAGAGTCTTCATCCATGTCCATCTGCAAAACTCTGAAAAACCCTATGGATTCACCAGGTTCATCAGCAAAACCAGTGGAAAGCCCTAATCATCAGATGATTGTGCCTAAGCAGCGGCAATTCCCATGCAAGTTTTGTAGCAAAAAGTTTCCAAGTTCTCAAGCCCTAGGAGGGCATCAAAATGCTCACAGACGTGAAAGAGTTCTCTCAAGAATAGATAGAGAAATTGACATGGGAACTTTTGGAGTTGGTGTTCACATGTACCCTTACTCCACCATGGCTCATCAACACCCTCTTCGTGGTGCTCCCTTTTATTATGAGGCTAACATGCACCCTTTGGCTCAGATGTCAACCATGCCATGGCCACTTGCACCACTTCCACCACTTCCACCTGGTTATGGAAATCAAGGGCTACACAACACCTCCATTTCAGGGCAACGATTTGGGATGAGCACCACCAACCTTGGAGGCATAGGTGTTGAAACTCCACAATACCATAGGGGTTTAGGGTTTGGTTTTGAACATAACCAAGTTCATGCATTTGATCCAACCAATGGAACTTCCATGCCTCGTCCAACTCTTAGTGGCCTTATGAGAAACCAGTATAGTGGGAATCAACCATTCTAA 759 0.444 MSDEFFGRGDESRKLKRKIEEASSAEVVDSELLLSMSLGNNKMVGESSSMSICKTLKNPMDSPGSSAKPVESPNHQMIVPKQRQFPCKFCSKKFPSSQALGGHQNAHRRERVLSRIDREIDMGTFGVGVHMYPYSTMAHQHPLRGAPFYYEANMHPLAQMSTMPWPLAPLPPLPPGYGNQGLHNTSISGQRFGMSTTNLGGIGVETPQYHRGLGFGFEHNQVHAFDPTNGTSMPRPTLSGLMRNQYSGNQPF 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00383 252 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 27 186 IPR044246 GO:0009788
Phco6g00383 252 Pfam C2H2-type zinc finger 85 110 - -
Phco6g00383 252 ProSiteProfiles Zinc finger C2H2 type domain profile. 85 112 IPR013087 -
Phco6g00383 252 Gene3D Classic Zinc Finger 68 121 - -
Phco6g00383 252 ProSitePatterns Zinc finger C2H2 type domain signature. 87 107 IPR013087 -
Phco6g00383 252 SUPERFAMILY beta-beta-alpha zinc fingers 82 112 IPR036236 -
Phco6g00383 252 MobiDBLite consensus disorder prediction 233 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00383 Phco-Chr6 3634954 3635712 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco6g00383 zf-C2H2_6 8.2e-07 CL0361