Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00377 ATGTACAGTGATGCTGAACCCGAATCTGAATCTGACCGCAACAGAATGAGTGCTGATGAAGAAGAACAACCTTCCTTCAAGAGCTTGGCCAAACAAACGGAGCAGAGTTATCAGTTACAGCTCGCACTCGCCCTTCGTCTCTCTTCTCACTCTTCTTCTTCATCCGATCACTCCTCCTCTCCGGCTCAGACATTATCTCACCGTTTTTGGGTGAATGGTTGTTTCCAATACTCTGACAAAATTCTAGATGGCTTTTACCTAATCCATGGGATGGATGCATACACATGGACTCTAAGTACTGATTTGCAGAATGTTGGTATTATTCCATCATTTGAATCACTCATGTTAGTTGACCCTGGTGATGACTCGTCAATTGTTGTGGTTGCTGTCGACAAATCTAGAGATCCTGGTCTGAGAGAATTGCAAAACAGGGTAGCAAGTCTTTCAAATAACTGGGTTACCACAAAAGATGCAACTGATCAGCTTGCAAGTCTTGTTTGCAATAGGATGGGGGGAGGATCTTTAACCGAGGAAAATTTAGGTATACGCTGGAAGGAATGCACCCGACTTCTTAAAAGCTGCCTGCACTCTGTCATTATTCCTGTTGGAAGCTTACCCATCGGCCTTTGTGTCCATCGAGCATTGCTGTTTAAAGTGTTGGCTGACTTAATCAACCTACCATGCCGTATTGCAAAGGGCTGCAAGTATTGCAGAAAGGATATGGGAGCTTCATGCATAGTGCAATTTGGTTCTGACAGGGAGTATATGATTGATTTAATTGGAAGGCCTGGGGCAGCATGTCAACCTGATTCTTCTCTGAATTCTGCATCTTCAATGTTGGTTGCTTCACCACTATGTCATCCAAAGTTCAAGCCAGTTGAAACAGCTGAATATACAAAGACACTAGCTCAATTGTATTTCTTGGACAGTCAAGCACTGCATCTTGTATTTGATACTACACCAGGACCTGCTGTTAATCACAGTGACAGAATGGATCCACAGCAAACCGAAGATTTGGGTGCAAATTATGCTGGTGGAAACAGGCATCTGATTGCTTTGATTCCTGGTGCAGAGGAATATGAGTATTTCAATGAAGTAGACCACCCAGTATTGGAATATCCAAGTCATGAAGTTGATCTTGACGAGGAGGATCTGGATATTCCTTGGAGTGAACTTATTTTGAAGGAGAACATTGGGACAGGGTCATTTGGAACTGTCCTTCGTGCAGATTGGCGTGGTTCTGATGTTGCTGTCAAGATTCTTAAAGTGCAAGGTTTTGATCCTGGGCGATTTAAAGAATTTCTAAAGGAGGTCTCACTCATGAAGCGCCTTCGGCATCCAAATATTGTACTCTTGATGGGTGCAGTTATTCAACCCCCTAAGTTATCAATAGTAACTGAGTATTTATCTAGAGGCAGTTTGTATGAATTTCTGCACATGCCTAATGTTGGATCATCACTTAGTGAGAGACGTCGCTTAAGTATGGCTTATGATGTGGCAAGCGGAATGAATTATCTTCATCAAATGAGACCTCCCATTGTTCATAGAGATTTGAAGTCTCCAAATCTTTTGGTTGATGATTCATACACTGTTAAGGTATGTGACTTTGGTCTTTCACGCACAAAGGCAAACACATTTCTTTCATCTAAAACCGCAGCCGGGACTCCTGAATGGATGGCACCTGAAGTCATCAGAGGTGAACTGTCAAACGAAAAATGTGATGTATTCAGCTTTGGTGTAATCTTGTGGGAACTAGTGACCCTGCAACAACCATGGAGACATTTAAATCCTTCACAGGTTGTTGCGGCCGTTGGATTTATGGACAAAAGGCTAGATATTCCAAGGCATGTGAATCCTGAAGTGGCTGCCTTGATTGAGCTCTCCTGGGCTACGGAACCCTGGAGACGGCCTTCTTTCTCCTATATTATGAAATGTTTGCAGCAAATAATTGCTGATGCTAGAGGGTGA 1968 0.4299 MYSDAEPESESDRNRMSADEEEQPSFKSLAKQTEQSYQLQLALALRLSSHSSSSSDHSSSPAQTLSHRFWVNGCFQYSDKILDGFYLIHGMDAYTWTLSTDLQNVGIIPSFESLMLVDPGDDSSIVVVAVDKSRDPGLRELQNRVASLSNNWVTTKDATDQLASLVCNRMGGGSLTEENLGIRWKECTRLLKSCLHSVIIPVGSLPIGLCVHRALLFKVLADLINLPCRIAKGCKYCRKDMGASCIVQFGSDREYMIDLIGRPGAACQPDSSLNSASSMLVASPLCHPKFKPVETAEYTKTLAQLYFLDSQALHLVFDTTPGPAVNHSDRMDPQQTEDLGANYAGGNRHLIALIPGAEEYEYFNEVDHPVLEYPSHEVDLDEEDLDIPWSELILKENIGTGSFGTVLRADWRGSDVAVKILKVQGFDPGRFKEFLKEVSLMKRLRHPNIVLLMGAVIQPPKLSIVTEYLSRGSLYEFLHMPNVGSSLSERRRLSMAYDVASGMNYLHQMRPPIVHRDLKSPNLLVDDSYTVKVCDFGLSRTKANTFLSSKTAAGTPEWMAPEVIRGELSNEKCDVFSFGVILWELVTLQQPWRHLNPSQVVAAVGFMDKRLDIPRHVNPEVAALIELSWATEPWRRPSFSYIMKCLQQIIADARG 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00377 655 Pfam Protein tyrosine and serine/threonine kinase 393 646 IPR001245 GO:0004672|GO:0006468
Phco6g00377 655 Gene3D Transferase(Phosphotransferase) domain 1 471 654 - -
Phco6g00377 655 MobiDBLite consensus disorder prediction 1 33 - -
Phco6g00377 655 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 68 649 - -
Phco6g00377 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 513 525 IPR008271 GO:0004672|GO:0006468
Phco6g00377 655 CDD STKc_MAP3K-like 398 644 - -
Phco6g00377 655 ProSitePatterns Protein kinases ATP-binding region signature. 398 419 IPR017441 GO:0005524
Phco6g00377 655 Pfam Ethylene-responsive protein kinase Le-CTR1 62 265 - -
Phco6g00377 655 Gene3D Phosphorylase Kinase; domain 1 385 470 - -
Phco6g00377 655 ProSiteProfiles Protein kinase domain profile. 392 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00377 655 FunFam Serine/threonine-protein kinase CTR1 471 654 - -
Phco6g00377 655 PRINTS Tyrosine kinase catalytic domain signature 507 525 IPR001245 GO:0004672|GO:0006468
Phco6g00377 655 PRINTS Tyrosine kinase catalytic domain signature 617 639 IPR001245 GO:0004672|GO:0006468
Phco6g00377 655 PRINTS Tyrosine kinase catalytic domain signature 554 564 IPR001245 GO:0004672|GO:0006468
Phco6g00377 655 PRINTS Tyrosine kinase catalytic domain signature 573 595 IPR001245 GO:0004672|GO:0006468
Phco6g00377 655 PRINTS Tyrosine kinase catalytic domain signature 466 479 IPR001245 GO:0004672|GO:0006468
Phco6g00377 655 FunFam Serine/threonine-protein kinase isoform 1 382 470 - -
Phco6g00377 655 MobiDBLite consensus disorder prediction 1 27 - -
Phco6g00377 655 SUPERFAMILY Protein kinase-like (PK-like) 373 646 IPR011009 -
Phco6g00377 655 SMART serkin_6 392 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00377 Phco-Chr6 3562840 3577462 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Phco6g00377 PK_Tyr_Ser-Thr 2.8e-66 CL0016