Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00332 ATGGCGACTGAAACTGACTTAAGAGATAGCTCTCTCACTTTGCTCAAACAAGGAGCGGAAGCTAGGGTTTTTGAGTCTTCTTTTGTGGGAAGGAAATGTGTTGTCAAGGAGCGCTTCTCAAAGAAGTACAGGCATCCAACTTTGGATTCTAAACTGACACTCAAGCGCTTAAATGCGGAGGCGAGGTGCGTGACCAAAGCAAGGAAACTTGGGGTTTTTACTCCCGTGCTGTATGCTGTGGATCCTGTGTTGCACACTTTAACATTTGAGTATGTTGAGGGCCCTTCAGTCAAGGATGTATTTCTTGAATTCGGGTCACGTGGCCTTGGTGAAGAGAGTCTGGACAACATTGCAACCCAAATTGGTCATGCAATTGGAAAGTTACATGATGGTGGTCTTATTCACGGTGATTTAACAACATCAAACATGTTGCTCAAGAAGGGTACCGAGGAGTTGGTTCTTATTGATTTTGGTTTGAGCTTCACCTCAACTCTACCCGAAGATAAAGCTGTTGATTTGTATGTTCTCGAAAGAGCTATTCTGTCAATGCATTCTTCGTGTGGGAATGTGATGGATCGGATACTTGCTGCATACCGCAAGTCATCAAAGCAGTGGTCATCCACATTGAACAAGTTGGCACAAGTGAGGCAAAGAGGACGAAAGAGGACCATGGTTGGATGA 681 0.4464 MATETDLRDSSLTLLKQGAEARVFESSFVGRKCVVKERFSKKYRHPTLDSKLTLKRLNAEARCVTKARKLGVFTPVLYAVDPVLHTLTFEYVEGPSVKDVFLEFGSRGLGEESLDNIATQIGHAIGKLHDGGLIHGDLTTSNMLLKKGTEELVLIDFGLSFTSTLPEDKAVDLYVLERAILSMHSSCGNVMDRILAAYRKSSKQWSSTLNKLAQVRQRGRKRTMVG 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00332 226 FunFam TP53-regulating kinase isoform X1 20 92 - -
Phco6g00332 226 Gene3D Phosphorylase Kinase; domain 1 20 92 - -
Phco6g00332 226 Pfam Protein kinase domain 51 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00332 226 SUPERFAMILY Protein kinase-like (PK-like) 12 174 IPR011009 -
Phco6g00332 226 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 7 226 IPR022495 GO:0004674
Phco6g00332 226 ProSitePatterns Tyrosine protein kinases specific active-site signature. 133 145 IPR008266 GO:0004672|GO:0006468
Phco6g00332 226 Gene3D Transferase(Phosphotransferase) domain 1 108 223 - -
Phco6g00332 226 SMART serkin_6 9 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00332 226 ProSiteProfiles Protein kinase domain profile. 9 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00332 226 FunFam Protein kinase superfamily protein 107 223 - -
Phco6g00332 226 NCBIfam KEOPS complex kinase/ATPase Bud32 18 220 IPR022495 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00332 Phco-Chr6 3171990 3173786 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Phco6g00332 Pkinase 4.7e-11 CL0016