Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00293 ATGAAGAATCAGGAACCGTTTCAAGCCCTCTTCTTCCTCTCCACCCTTGTGCTGCTTTTTATCTCCTCTGCCAAGGGAAAGTGTCCACCATCCTTTCTTTGTGGGAACCTCGGCACCATGTATTTCCCTTACACTGACACGAAACACCCTCATTGTGGCTTGTTGGTGATACATGGCTGCGTTGACAGGGACCCAGATGCGGTTAAAACAATTAAGAACAAAGGAGAATGGTTTTACATCACACGTGATCCAAACGCAAGCACCCTTTTGTTCAGAGATGATGGACTTCGCACCATGCTGCTGACAGGAAGATGTGGGGTGTTCAGCAAAAACTACACCAGTTTGGACACCACTTCTCCTTTCCTTTCACTTCAATTCACGACTGTTACTCTATTCACATGCAACCGCACCCTCAATATCACCCCTCCTTCTTCAGCATTTTCTAAATCTACAATATGCCCGAATGAGGACATCTTCTATGGCACGTCTAATGTTGATGAGTCCTTCAGTTACGGTTCCAAAGAGCTTCCAGATTCTTATTTTGAACTCTGTTCAATGGTTAGACTTCCAATAAGAGATCCAGAACTTGTACCTAACTCAAATGGAAGCCTCTTTGACTATGTATCAGCTGATATTCCTGTTAGAACGGAAGTGTCCAATCATTGTTCTTCTTGTTACCGTCATAGAGGAGGCCAGTGTCAACTTGACAGCCAAGGGAAGTTCTTCTGCATACAAGAGAAAACTAGTAGAAAGGTGAAGATAGTGGTAGCAGCTACATCAGCTGCTGGAGCACTGGGAATATTGATGGTCTTGGCTTGCATCTTACGAAGATACTATTGCCACAAGAAGAATCCCACTTACATAATGATTGAGAACTTTCTGAAGCAACATGGACACCTTTCAGCCAAAAGGTACAGTTACTTCGAGGTAAAGAAAATGACCAACTCCTTCAAAAACAAATTAGGCCAAGGAGGGTTCGGTAGTGTATACAAAGGGAGGTTACAAAATGGAAGTCTTGTGGCAGTGAAGGTCTTAAGTAAGTTAAAAGGTGATGGAGAAGAATTCATCAATGAAGTTGCTAGCATTAGCATGACTTCTCATGTTAACATTGTCACTTTACTGGGGTTTTGTTTGGAAGGCTCCAAAAGATTTCTCATATACGAGTACATGCCCAATGGATCCCTTGAAAAGTTCATATATGAAGAGAAAGATCCTTCAAGGTTTAAACTCACATTGAATTGCACAACAATGTACAATATTGCCATTGGTGTTGCTCGAGGACTGGAGTATTTGCACAAGGGTTGTAACACCAAAATCTTGCATTTTGACATAAAACCTCACAATATATTACTGGATGAGTTGTTTTGCCCAAAAATATCAGATTTTGGACTTGCTAAAATATGTCCTAGAGAGAAAAGTATTGTATCAATGATGGTTGCCAGGGGAACCATAGGATATATTGCTCCTGAATTGTTCTGCAGAAATTTTGGTGGAGTGTCACATAAATCAGATGTCTACAGTTATGGAATGATGGTCTTGGAAATGCTAGGTGCTAGAGAGAATAATAATCGCAGAGTTGATTTTCCAAGTGAAGATTACTTTCCACATTGGATTTACAACCATCTTGAATCAAATGAAGATCTTCAATTTCGATGTCCCAAAAATCAAAATGATGAAGAAATGGTGAGAAAAATGACTATTGTAAGTTTGTGGTGCATACAAACCGACCCTTCAAATCGACCTGCAATGAGTAAAGTGGTCGAAATGATGGAAGGAAGCATTAGGTCGCTGCAAATTCCACCCAAATCTTTCCTTTTTTCATCTTCGGTTCCCCAATCACAATTAAGTGATTCTTCATAG 1860 0.4059 MKNQEPFQALFFLSTLVLLFISSAKGKCPPSFLCGNLGTMYFPYTDTKHPHCGLLVIHGCVDRDPDAVKTIKNKGEWFYITRDPNASTLLFRDDGLRTMLLTGRCGVFSKNYTSLDTTSPFLSLQFTTVTLFTCNRTLNITPPSSAFSKSTICPNEDIFYGTSNVDESFSYGSKELPDSYFELCSMVRLPIRDPELVPNSNGSLFDYVSADIPVRTEVSNHCSSCYRHRGGQCQLDSQGKFFCIQEKTSRKVKIVVAATSAAGALGILMVLACILRRYYCHKKNPTYIMIENFLKQHGHLSAKRYSYFEVKKMTNSFKNKLGQGGFGSVYKGRLQNGSLVAVKVLSKLKGDGEEFINEVASISMTSHVNIVTLLGFCLEGSKRFLIYEYMPNGSLEKFIYEEKDPSRFKLTLNCTTMYNIAIGVARGLEYLHKGCNTKILHFDIKPHNILLDELFCPKISDFGLAKICPREKSIVSMMVARGTIGYIAPELFCRNFGGVSHKSDVYSYGMMVLEMLGARENNNRRVDFPSEDYFPHWIYNHLESNEDLQFRCPKNQNDEEMVRKMTIVSLWCIQTDPSNRPAMSKVVEMMEGSIRSLQIPPKSFLFSSSVPQSQLSDSS 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00293 619 Gene3D Transferase(Phosphotransferase) domain 1 390 599 - -
Phco6g00293 619 FunFam PR5-like receptor kinase 390 602 - -
Phco6g00293 619 FunFam serine/threonine-protein kinase PBS1-like 289 389 - -
Phco6g00293 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672|GO:0006468
Phco6g00293 619 SUPERFAMILY Protein kinase-like (PK-like) 298 590 IPR011009 -
Phco6g00293 619 Gene3D Phosphorylase Kinase; domain 1 291 389 - -
Phco6g00293 619 Pfam Protein kinase domain 318 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00293 619 ProSitePatterns Protein kinases ATP-binding region signature. 321 343 IPR017441 GO:0005524
Phco6g00293 619 PANTHER RUST RESISTANCE KINASE LR10-RELATED 289 609 IPR045874 GO:0004672
Phco6g00293 619 SMART serkin_6 315 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00293 619 ProSiteProfiles Protein kinase domain profile. 315 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00293 Phco-Chr6 2854879 2857524 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phco6g00293 Pkinase 5.3e-46 CL0016