Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00260 ATGGGAAAGAAGAAGAGAAGTAGGGTTTCAGATGATGAGGAATTCGAAACCCACTCTTCTGATCACAACGAAAACACTCTCTATCAGGTTCTCAATGTGGAGAGAACAGCATCTCAACCGGAAATAAAGAAGGCATACTACAAGTTGGCATTGAAACTACATCCTGATAAGAACCCTGGTGATGAGGAAGCTAAATCTAAGTTTCAGCAATTGCAACATGTTATCTCAATTCTTGGGGATGAAGAAAAGCGGGCTGTTTATGATCAGACTGGTTGTATTGATGACGCTGAGCTTGCAGGGGATGTTGTTCAGAATCTCAAAGAATATTTCAGAGCAATGTACAAGAAGGTCACTGAAGCTGATATTGAGGAGTTTGAAGCAAACTATAGGGGATCTGACTCTGAGAAAAAGGATTTGATTGACCTCTACACGAAGTACAAGGGCAAAATGAACAGGTTATTCTGTTCAATGCTTTGTTCTGATCCTAAACTTGATTCACACCGATTCAAGGATATTCTTGATGAGACTATAGCTGCTGGAGAACTAAAGGAAACAAAAGCCTACAAGAAATGGGCAAAGAAAATATCAGAAACCAAGCCACCTACTAGTCCCTTAAGAAGGCAGGCAAAATCATCAAAGAAACAATCAGAAACAGATCTGTGTGCTATCATATCACAGCGTAGACATGAGAGGAAAGACCGCTTTGATTCTATGTTCTCATCTCTAATTTCAAAGTATGGTGGGGGTCAAATGCCAGAACCCTCTGAAGAGGAATTTGAAGCTGCACAGAGAAAAGTGGAAAAGCGTAGATCCTCAAAAAAGTCAAAGCAAAGATAA 837 0.4014 MGKKKRSRVSDDEEFETHSSDHNENTLYQVLNVERTASQPEIKKAYYKLALKLHPDKNPGDEEAKSKFQQLQHVISILGDEEKRAVYDQTGCIDDAELAGDVVQNLKEYFRAMYKKVTEADIEEFEANYRGSDSEKKDLIDLYTKYKGKMNRLFCSMLCSDPKLDSHRFKDILDETIAAGELKETKAYKKWAKKISETKPPTSPLRRQAKSSKKQSETDLCAIISQRRHERKDRFDSMFSSLISKYGGGQMPEPSEEEFEAAQRKVEKRRSSKKSKQR 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00260 278 CDD DnaJ 26 80 IPR001623 -
Phco6g00260 278 SMART dnaj_3 25 83 IPR001623 -
Phco6g00260 278 MobiDBLite consensus disorder prediction 201 219 - -
Phco6g00260 278 SUPERFAMILY Chaperone J-domain 25 97 IPR036869 -
Phco6g00260 278 MobiDBLite consensus disorder prediction 243 278 - -
Phco6g00260 278 Gene3D DnaJ domain 8 110 IPR036869 -
Phco6g00260 278 MobiDBLite consensus disorder prediction 1 24 - -
Phco6g00260 278 MobiDBLite consensus disorder prediction 1 21 - -
Phco6g00260 278 MobiDBLite consensus disorder prediction 194 219 - -
Phco6g00260 278 PRINTS DnaJ domain signature 28 46 IPR001623 -
Phco6g00260 278 PRINTS DnaJ domain signature 63 83 IPR001623 -
Phco6g00260 278 PRINTS DnaJ domain signature 46 61 IPR001623 -
Phco6g00260 278 PRINTS DnaJ domain signature 83 102 IPR001623 -
Phco6g00260 278 Pfam DnaJ domain 27 88 IPR001623 -
Phco6g00260 278 ProSiteProfiles dnaJ domain profile. 26 91 IPR001623 -
Phco6g00260 278 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 14 277 IPR042977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00260 Phco-Chr6 2508343 2511012 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00260 6 2508343 2511012 Phco6g00260 6 2508343 2511012 ECH
Phco2g01572 2 46013746 46025026 Phco6g00260 6 2508343 2511012 PCT