Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00229 ATGCATTATGCTTCGCAGGAGTTGAACGGAGTTCACAGCAGTGTGGCCAACGTTGGAGGCTCAGAAAAAAACAGCTTCAACTTCCAACATCATGAGAAACATCTGTTTGATGTTCCCGGTTCATGTTTGAACTTCGATTCGCAAAATTTTATGTGTCAGTCTTCTGGCGACCAGTCGGCTCCACTATTCGGAAGTGTTGTCGATTCCTTTTTTTCCAGCCATGGAGACACGTTCTGTGAAACGTATGGTGAACTTTACGAGCATTTCAGAAACAGGCAAAATAACATCTTGGAGGGTGATGCTTCTGCCCCAGTTAATCGGGTTGAGGTTGTTTCTGCCACTTCTGGAAACTCGGCTTCTAGCATGGTTCCAACGAGGAAAAAAGGAATAAAATGGACCAAAGACTTGCATGAACTGTTCGTAGCAGCGGTTAATTGCCTTGGTGGTGCTCAAAAAGCAAAGCCCAAGGAAGTGCTAAAGATGATGAATTCAAAGTCCCTGACAATTTTGCATGTTAAAAGCCACTTGCAGAAATATCGATCCACAATGTACGTGAAGAACACTTCCAAAGAAGGGCGAGAAGAAACTCATGACAGAGACACAGTGACTGAACTTCAACAGAAAATACGTATGCAAATTGAGGAATCACGACAACTGCAACTGGAGATTTCGAGGGGTATTCAAGAACAATTAGAGCTTCAACGAAATTTGCAAAAGCTAGTCCAAGAACAAAGGAAACAGGTCAACGAAGCAAACAAGGCAAATTGA 768 0.4297 MHYASQELNGVHSSVANVGGSEKNSFNFQHHEKHLFDVPGSCLNFDSQNFMCQSSGDQSAPLFGSVVDSFFSSHGDTFCETYGELYEHFRNRQNNILEGDASAPVNRVEVVSATSGNSASSMVPTRKKGIKWTKDLHELFVAAVNCLGGAQKAKPKEVLKMMNSKSLTILHVKSHLQKYRSTMYVKNTSKEGREETHDRDTVTELQQKIRMQIEESRQLQLEISRGIQEQLELQRNLQKLVQEQRKQVNEANKAN 255
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00229 255 Coils Coil 227 254 - -
Phco6g00229 255 FunFam Two-component response regulator 124 187 - -
Phco6g00229 255 Gene3D - 126 185 - -
Phco6g00229 255 Coils Coil 202 222 - -
Phco6g00229 255 Pfam Myb-like DNA-binding domain 131 180 IPR001005 -
Phco6g00229 255 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 120 249 IPR044848 GO:0003700
Phco6g00229 255 NCBIfam myb-like DNA-binding domain, SHAQKYF class 127 181 IPR006447 GO:0003677
Phco6g00229 255 SUPERFAMILY Homeodomain-like 125 182 IPR009057 -
Phco6g00229 255 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 124 184 IPR017930 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco6g00229 Phco-Chr6 2271526 2273410 Dispersed/Tandem
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phco6g00229 Myb_DNA-binding 5.6e-07 CL0123