Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00207 ATGAAACTCCCTTGGTTAGTCAAATATCAATATGCAGCAATACTCTTGGTTACCATTGCCCTTACCAAAGTTACCTGTTTTCATTTCAATTTCCCTACCTTCCAACCACAGGATAAGTCTAATCTATGGCTGCACAATAATTCAAGAATATACTTAGATGCAATCCAAGTAACCCCTGATATTCGTGGTCCTATACATAACTATTCTGGACGTTTTTTCTACAGAAAGCCATACCAACTTTGGAAACAGAAGAACCAAAACGAAATAGCTTCCTTCAACACCACTTTTGTGCTCAGAATCACTCCAGAAACCCCTGGTGGTGAAGGTTTGGCCTTCATCTTAACTTCAGATATGACTCTCCCAGAAAACAGTGATGGAGAATGGCTTGGTATCGTAAATGCTAGTTCCAATGGAACTTCACAGGCTGGTATTCTAGCAGTGGAGTTTGACACAAGACACAGTTTCACAGAAGATGGCCCTGACAATCATCTTGGCATCAACATAAACAGCATCAACTCAATCGAACAGGTTCCGTTGATAAACACTCGGGTCAATCTTTCGTCAGGTCAAGATGTCAAAGTTCACATTCAATACATTAATGACATAATATCGGTTTTTGGTGCCATGACTGGAACTTCTGAAGAATCTATGGAGACCCTCTTGGTAACTCCACCTCTTAATTTATCTTCCTTTCTTCAACAAGAGGTTTACCTTGGTTTCTCCGCCTCAACAAGTACCTACACGCAGCTGAACTGTGTAAGATCATGGGAATTCAGTGGTGATGATATTAGAGATAATGTCCGAAGTCTCTTGTGGATTTATGTTACTGTTCCAACCGTGATTGTTTTAATTATCATTGGTGGGTTGGTGATATTTTTCTTGCGCCGGAAAAAGAGTCGCCATATGGAGGGGCCAGAAGATGCATATCCAAGGATAGAGGATCAGATTCAATATTCCTCTATGGCTCCAAAGAAGTTTAGGCTAAAGGAAATAACAAAAGCAACTGGTGGATTCAGCCCTCAAAACAAGCTTGGACAAGGTGGGTTTGGAACTGTGTATAAGGGGCTATTGGAAAATAAGGAGGTAGCTGTAAAGAGGGTCTCCAAGAACTCACGTCAAGGGAAGCAAGAGTTTGTGGCAGAAGTGACAACAATTGGAAGCCTTCACCATAGAAACTTGGTGAAACTCACTGGTTGGTGCTATGAGAATAAAGAGCTCCTCCTTGTGTACGAGCTCATGCCTAACGGTAGCCTAGACAAGTACCTCTTTGGTGACAACAATTTTGGTAATTGTGGCCTTGAAGGAGGGTATTCTCTAACACTGGATTGGGAAACTAGGCACAAAGTGATATATGGGGTGGCTCAAGCTCTTGACTACCTTCACAATGGGTGTGAGAAGAGGGTTCTCCACAGAGACATCAAGGCCAGCAACATAATGCTGGACTTAGATTACAATGCCAAGTTGGGAGACTTTGGATTGGCTAGAACAATTCAGCAGAGAAATGAAACACATCACTCTACAAAAGAGATTGCAGGCACACCCGGGTACATGGCCCCAGAAACCTTTCTCACGGGAAGGGCAACAGTGGAGACAGATGTGTATGCATTTGGGGTTCTTGTGTTGGAAATAGTGTGTGGAAAGAGGCCAGGGAATGTGTATGCAGAAGATGACTACAAGAACAGCATTGTGTATTGGGTGTGGGATTTGCATGGGAAGGGAAAAGTGGTTGGTTGTGTTGATGGAAGGTTGAAGAAGGAGGAGATTAAGGAGGAAGAGGTGGAGTGTGTTCTTGTTCTTGGCTTGGCTTGTTGCCACCCAAACCCACACCAAAGGCCATCCATGAGAACTGTCCTTCAGGTTCTGAATGGGGAAGCACCTCCACCTGAAGTGGCTAGGGAAAGACCAGCTTTTATGTGGCCTGCTATGCCTCCATCCTTCACAGAAGCTAAAGATAGCTCCCTCATCCAAGGAACACTCACTGCTTTCACTGAGATCATTGGAAGATGA 2007 0.4365 MKLPWLVKYQYAAILLVTIALTKVTCFHFNFPTFQPQDKSNLWLHNNSRIYLDAIQVTPDIRGPIHNYSGRFFYRKPYQLWKQKNQNEIASFNTTFVLRITPETPGGEGLAFILTSDMTLPENSDGEWLGIVNASSNGTSQAGILAVEFDTRHSFTEDGPDNHLGININSINSIEQVPLINTRVNLSSGQDVKVHIQYINDIISVFGAMTGTSEESMETLLVTPPLNLSSFLQQEVYLGFSASTSTYTQLNCVRSWEFSGDDIRDNVRSLLWIYVTVPTVIVLIIIGGLVIFFLRRKKSRHMEGPEDAYPRIEDQIQYSSMAPKKFRLKEITKATGGFSPQNKLGQGGFGTVYKGLLENKEVAVKRVSKNSRQGKQEFVAEVTTIGSLHHRNLVKLTGWCYENKELLLVYELMPNGSLDKYLFGDNNFGNCGLEGGYSLTLDWETRHKVIYGVAQALDYLHNGCEKRVLHRDIKASNIMLDLDYNAKLGDFGLARTIQQRNETHHSTKEIAGTPGYMAPETFLTGRATVETDVYAFGVLVLEIVCGKRPGNVYAEDDYKNSIVYWVWDLHGKGKVVGCVDGRLKKEEIKEEEVECVLVLGLACCHPNPHQRPSMRTVLQVLNGEAPPPEVARERPAFMWPAMPPSFTEAKDSSLIQGTLTAFTEIIGR 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00207 668 CDD lectin_legume_LecRK_Arcelin_ConA 27 259 IPR001220 GO:0030246
Phco6g00207 668 ProSiteProfiles Protein kinase domain profile. 338 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00207 668 CDD STKc_IRAK 344 623 - -
Phco6g00207 668 FunFam Probable L-type lectin-domain containing receptor kinase S.5 323 412 - -
Phco6g00207 668 Gene3D - 25 268 - -
Phco6g00207 668 FunFam probable L-type lectin-domain containing receptor kinase S.5 413 627 - -
Phco6g00207 668 Gene3D Phosphorylase Kinase; domain 1 323 412 - -
Phco6g00207 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Phco6g00207 668 Pfam Legume lectin domain 28 265 IPR001220 GO:0030246
Phco6g00207 668 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 259 IPR013320 -
Phco6g00207 668 PANTHER - 54 628 - -
Phco6g00207 668 ProSitePatterns Protein kinases ATP-binding region signature. 344 365 IPR017441 GO:0005524
Phco6g00207 668 SUPERFAMILY Protein kinase-like (PK-like) 319 621 IPR011009 -
Phco6g00207 668 SMART serkin_6 338 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00207 668 Pfam Protein kinase domain 341 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00207 668 Gene3D Transferase(Phosphotransferase) domain 1 413 627 - -
Phco6g00207 668 FunFam Probable L-type lectin-domain containing receptor kinase S.5 26 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00207 Phco-Chr6 2074206 2076212 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phco6g00207 Pkinase 4e-50 CL0016