Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00160 ATGAAAGATGCTAACCTTTATTCACCACAAGAACTGCACCTCTGGTCAACCGAAAAGCGATTACTGGAGCAACGTAGATTTCCCCGCAAATGGTTGAAGGATCCAGCGGAATGTTGTTTCTCTAACTATGTCAGAGACTTGTGTGAGAGTAAGAAGGATCGCAACATCGGTGATGGCGTCGTCGCGGCGAGAGTGGAATCTCGCGCGTTGGTGAAAAAACTTGCAACTCCAATGGGCAACAACTGCGTGGGACCGAACGTCGGTAACGGCTTCATCCAGTCCGTTACGGCGGCGGTGTGGAAGACGCGCCCGCCGGAGTCCCGCCTTCCGCCGCCTTCCGCTGAGACCAAAACCTCGACTCCGGTACCGAACTCCGAGAAAGACTCGGAATCCGCGCCTTCCCAATCCTCGGATCCTCCGTTGCGGGTGCAAAACACACCGCCCGAGCAGGTGAAAATGCCCGCCTCGGCGGAGGGGAAGCCGCTTCCGCTGGACCACGAGAAGCCGGCGTCGAGCCATGCCGAGCAGGCTGCCGGCGACAAGGAGAAGAAACCCACGCACGTGAAACGGGTGTCCAGTTTGGGGCTTCAAGTGGAGTCGGTGCTGGGTCGAAAAACAGAGAACATGAAGGAGTTCTTCAGCTTGGGGAGGAAGCTGGGGCAGGGGCAATTCGGGACGACGTTTCTGTGCGTGCAAAAGGGGACGAACAAGGATTTCGCGTGCAAGTCCATCGCTAAGCGGAAGTTGACGACGCAGGAGGATGTGGAGGATGTGAGGAGGGAGATTCAGATCATGCACCACTTGGCGGGGCACCCAAACGTAATTCAGATCGTTGGGGCTTACGAGGACGCCGTTGCGGTGCACCTCGTGATGCAGCTCTGCGCTGGGGGGGAGCTCTTTGACAGGATCATACAGAGGGGGCATTACACCGAGAAGAAGGCCGCGGAACTTGCTAGGTTGATTGTTAGTGTGGTGGAGGCTTGTCACTCTCTTGGGGTCATGCACAGGGATTTAAAGCCCGAGAATTTTTTGTTCGTTAATCAGGAGGAAGAATCTCCCCTTAAGACCATTGATTTTGGACTCTCCGTGTTCTTTAGACCAGGTGAAACATTCACTGATGTGGTTGGGAGCCCATACTATGTGGCCCCTGAAGTTTTGCGGAAGAACTATGGTCCAGAATGTGATGTTTGGAGTGCTGGGGTGATCATCTATATTTTACTCAGTGGAGTTCCCCCATTTTGGGATGAAACCGAACAGGGAATATTTGAGCAAGTTTTGAAAGGAGAGCTTGACTTTGTTTCTGAACCCTGGCCAAGCATATCTGAAAGCGCAAAGGATCTTGTTCGAAGGATGCTTGTAAGGGACCCTAAGAAGCGCCTGACAGCACATGAAGTTCTTTGCCACCCGTGGGTGCAAGTCGGAGGCGTTGCTCCTGATAAACCACTTGATTCTGCTGTTTTGTCTCGTTTGAAGCAGTTCTCTGCAATGAACAAGCTCAAAAAAATAGCCATTCGAGTAATTGCTGAAAGTTTGTCTGAGGAAGAAATTGCAGGACTGAAAGAAATGTTCAGGATGATAGACTCAGATAATAGCGGACAGATCACTGTTGAGGAATTGAAAAATGGTTTGGAGAGAGTGGGTTCTGTTCTTAAGGATTCTGAAATTACTTGGTTAATGCAAGCGGCAGACGTTGATAACAGTGGTACCATAGACTATGGTGAATTCATAGCAGCTATGCTACACCTAAACAAGATCCAGAAGGAAGATCATCTATATGCAGCATTCACATACTTTGACAAAGATGGGAGTGGATACATTACACACGATGAGCTCCAACAAGCCTGCGAACAGTATGGCTTGCAGGATCATCACCTGGATGAGATAATACGTGAAATTGACCAGGATAATGATGGACGCATTGATTACAGTGAGTTTGTAGCTATGATGCAAGACACTGGTTTTGGCAAAAAGGGATTATAG 1980 0.5015 MKDANLYSPQELHLWSTEKRLLEQRRFPRKWLKDPAECCFSNYVRDLCESKKDRNIGDGVVAARVESRALVKKLATPMGNNCVGPNVGNGFIQSVTAAVWKTRPPESRLPPPSAETKTSTPVPNSEKDSESAPSQSSDPPLRVQNTPPEQVKMPASAEGKPLPLDHEKPASSHAEQAAGDKEKKPTHVKRVSSLGLQVESVLGRKTENMKEFFSLGRKLGQGQFGTTFLCVQKGTNKDFACKSIAKRKLTTQEDVEDVRREIQIMHHLAGHPNVIQIVGAYEDAVAVHLVMQLCAGGELFDRIIQRGHYTEKKAAELARLIVSVVEACHSLGVMHRDLKPENFLFVNQEEESPLKTIDFGLSVFFRPGETFTDVVGSPYYVAPEVLRKNYGPECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGELDFVSEPWPSISESAKDLVRRMLVRDPKKRLTAHEVLCHPWVQVGGVAPDKPLDSAVLSRLKQFSAMNKLKKIAIRVIAESLSEEEIAGLKEMFRMIDSDNSGQITVEELKNGLERVGSVLKDSEITWLMQAADVDNSGTIDYGEFIAAMLHLNKIQKEDHLYAAFTYFDKDGSGYITHDELQQACEQYGLQDHHLDEIIREIDQDNDGRIDYSEFVAMMQDTGFGKKGL 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00160 659 CDD STKc_CAMK 212 470 - -
Phco6g00160 659 ProSitePatterns EF-hand calcium-binding domain. 563 575 IPR018247 -
Phco6g00160 659 ProSiteProfiles EF-hand calcium-binding domain profile. 514 549 IPR002048 GO:0005509
Phco6g00160 659 ProSiteProfiles EF-hand calcium-binding domain profile. 620 655 IPR002048 GO:0005509
Phco6g00160 659 ProSitePatterns EF-hand calcium-binding domain. 527 539 IPR018247 -
Phco6g00160 659 FunFam Calcium-dependent protein kinase SK5 299 483 - -
Phco6g00160 659 SMART serkin_6 213 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00160 659 ProSitePatterns EF-hand calcium-binding domain. 633 645 IPR018247 -
Phco6g00160 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 333 345 IPR008271 GO:0004672|GO:0006468
Phco6g00160 659 MobiDBLite consensus disorder prediction 102 191 - -
Phco6g00160 659 SMART efh_1 624 652 IPR002048 GO:0005509
Phco6g00160 659 SMART efh_1 590 618 IPR002048 GO:0005509
Phco6g00160 659 SMART efh_1 518 546 IPR002048 GO:0005509
Phco6g00160 659 SMART efh_1 554 582 IPR002048 GO:0005509
Phco6g00160 659 MobiDBLite consensus disorder prediction 161 189 - -
Phco6g00160 659 ProSiteProfiles EF-hand calcium-binding domain profile. 550 585 IPR002048 GO:0005509
Phco6g00160 659 PANTHER SERINE/THREONINE-PROTEIN KINASE 205 645 - -
Phco6g00160 659 ProSiteProfiles Protein kinase domain profile. 213 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00160 659 Pfam Protein kinase domain 214 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g00160 659 FunFam Calcium-dependent protein kinase 1 479 653 - -
Phco6g00160 659 ProSiteProfiles EF-hand calcium-binding domain profile. 586 619 IPR002048 GO:0005509
Phco6g00160 659 Gene3D Transferase(Phosphotransferase) domain 1 299 475 - -
Phco6g00160 659 SUPERFAMILY EF-hand 511 650 IPR011992 -
Phco6g00160 659 Pfam EF-hand domain pair 589 650 IPR002048 GO:0005509
Phco6g00160 659 Pfam EF-hand domain pair 519 579 IPR002048 GO:0005509
Phco6g00160 659 Gene3D - 497 649 - -
Phco6g00160 659 SUPERFAMILY Protein kinase-like (PK-like) 213 472 IPR011009 -
Phco6g00160 659 MobiDBLite consensus disorder prediction 112 144 - -
Phco6g00160 659 Gene3D - 487 580 - -
Phco6g00160 659 ProSitePatterns Protein kinases ATP-binding region signature. 219 246 IPR017441 GO:0005524
Phco6g00160 659 Gene3D Phosphorylase Kinase; domain 1 215 298 - -
Phco6g00160 659 FunFam Calcium-dependent protein kinase 1 215 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00160 Phco-Chr6 1569899 1576866 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phco6g00160 Pkinase 2.7e-74 CL0016