Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00095 ATGTCAAGTTCCAGAAGAAAACTAACCTTCAACACCGTCTCCGTCAGCTTGGGCTGCGGCACCTGCAGGAGGCCCAAGCTTCTCTGCCGCATATTCCACCCCAAACGTCGCCCCAAGAGGCCCACCTTCCAAGCCCAAACCCATCACTGGGCTCAAGACAGAGACGACACAACTACCACCGCCACCACCAGCACCACAACCACCACCACCTTCTCTCCCTGCCACGTGGACTCTTCCGCGCAGTTCTGCGACTACGCGAAGAGCGTGCGAGGGTTCGGGCGCGCGGGGAGCGAGGGCGTGGCGGTGGAGAAAGACTCCGAAGACCCTTACTTGGACTTCCGACACTCCATGCTCCAGATGATACTCCAAAACGAGATTTACTCAAAAGACGACCTCAGAGAACTTCTCAACTGTTTCCTCCAGCTCAATTCCCCGGACCACCACGGTGTCATCGTCAGAGCCTTCACTGAGATCTGGAACGGCGTTTTCTCCGTCAGCTCCGGCGCCAACGCCTTCCACCGCAACCGTAAGTCTCGTGACTTCTAG 546 0.5769 MSSSRRKLTFNTVSVSLGCGTCRRPKLLCRIFHPKRRPKRPTFQAQTHHWAQDRDDTTTTATTSTTTTTTFSPCHVDSSAQFCDYAKSVRGFGRAGSEGVAVEKDSEDPYLDFRHSMLQMILQNEIYSKDDLRELLNCFLQLNSPDHHGVIVRAFTEIWNGVFSVSSGANAFHRNRKSRDF 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00095 181 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 45 164 IPR038933 GO:0045892
Phco6g00095 181 Pfam Transcriptional repressor, ovate 106 162 IPR006458 -
Phco6g00095 181 MobiDBLite consensus disorder prediction 39 68 - -
Phco6g00095 181 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Phco6g00095 181 NCBIfam uncharacterized plant-specific domain TIGR01568 100 160 IPR006458 -
Phco6g00095 181 ProSiteProfiles OVATE domain profile. 102 161 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00095 Phco-Chr6 959403 959948 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Phco6g00095 Ovate 3.4e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00095 6 959403 959948 Phco6g00095 6 959403 959948 ECH