Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00094 ATGAAGTTCTTTTCTCTTCTCAAAAACAACAACACCGCCAACAACCACCATCAAAGATCATCCTCCTCCTCCTCCTGGCCCTGGCCCTCCTGCCACCAACCCAGAACCCTCTCATTCAGAGCCACCACCGCCGCCGCCACCACCAACCACGACGTTTTCAAAGGCACCAACTCAACCACCTCCTTCGTCGCTCAAACTCCGGATTCCTTCTTCACGGACTCGCCTAACTCCGCCAGCTTCTCTTCGGCTTCCAACATATCCCGCACCGTGGACCCCACCGAGACGGTGATTCGCGGCCTTCGTTCGGACCGGCTTTTCTTCGAACCGGACCAGACCAGCTCCATATGGGAGGCCAAACTCGCCACCCTCGCACCCTTCAAAAACAGCGTGGTTTTCTCCATGGACTCCACGCACCCTTACGTGGATTTCCGCAGGTCCATGGAGGACATGGTGGCCACCCACAGCGTCACTGATTGGGAGGATCTCGAGGACCTTCTCTGCTGGTTCTTGAAGGTCAATGCTCCAAACACTCACCACTATATCCTCCGTGCTTTCGTTGATTTCTTGTTCGCTCTCGCACTCGCTTCTTCATCTTCTAACGCCATTTGTAGTAGCACCACTACTATCTCTTCTCTCTCTTCTTCTTCCTCCTCTTGCACCACTCGCTGCACTTTCTGTTTTGAGGAAGAAGTTGAACACCAACACAGTTCTTAA 714 0.535 MKFFSLLKNNNTANNHHQRSSSSSSWPWPSCHQPRTLSFRATTAAATTNHDVFKGTNSTTSFVAQTPDSFFTDSPNSASFSSASNISRTVDPTETVIRGLRSDRLFFEPDQTSSIWEAKLATLAPFKNSVVFSMDSTHPYVDFRRSMEDMVATHSVTDWEDLEDLLCWFLKVNAPNTHHYILRAFVDFLFALALASSSSNAICSSTTTISSLSSSSSSCTTRCTFCFEEEVEHQHSS 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00094 237 MobiDBLite consensus disorder prediction 9 29 - -
Phco6g00094 237 ProSiteProfiles OVATE domain profile. 132 191 IPR006458 -
Phco6g00094 237 Pfam Transcriptional repressor, ovate 136 192 IPR006458 -
Phco6g00094 237 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 25 194 IPR038933 GO:0045892
Phco6g00094 237 NCBIfam uncharacterized plant-specific domain TIGR01568 130 193 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00094 Phco-Chr6 946226 946939 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Phco6g00094 Ovate 4e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g00094 6 946226 946939 Phco6g02987 6 51055930 51056661 ECH
Phco6g00094 6 946226 946939 Phco6g00094 6 946226 946939 ECH
Phco2g02226 2 52940648 52941484 Phco6g00094 6 946226 946939 PCT