Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00080 ATGTTGCAGGATGTTATCCAACCCCCAACACCAGATGAGCAACTCCCCATTGATGAGATTTCAAGCCCAATCAGTGCCCGAATTTTCGAACTTTGCGACCCTGATTTTTTCCCAGACACACTGCAAAATTCTGAGGTTACCTCCAGCTCCAATTGTTGCCATGAAGAGAAGTCCTCATATGCCACAACCATATCTCCACCTTTAGATGTAGTAGACAACAAGATCAATATCAATAGCAATAGCAACATAGTTACCACCTCATCTAGTACTACCACAGCCAGCACCACTACCAACAACAACATCAACAACAACAACACAACAAACAGCAATAACCTGTCCATCTTCTTTGACTCTCAAGATGAAATTGACAATGACATATCAGCCTCCATAGACTTCTCATCATCTCCATCTTTTGGTGTTCCACCACTTCTCGCAATCACAACTCAGCAGGATCAGTTTGATTTCTCTTCAGCTCAGCCACAGGTGCAGCTATCAGCAGCAGGTTCAGTTTTGAAGGGCCTCGCTCAGTACCCTACTGATCCTGTGGTTGCACCCCTTATTGGGGCTCCATTAGCATCAGTTTTTGATGATGATTGCATCTCTTCCATCCCTTCTTATTTGCCTCTCAACCCTTCATCTCCCTCTTGCTCTTATCTCGGTCCTGGCATAGGAGCCTACATGCCTCCTCCTGGTTCCCTTACCACTGCCTTGTCTGCCGAGAGTTCTGGATTGTTTGGTGCCAACATTCTACTGGGGTCCGAACTGCAGACACAAGAACTGGACTACCAGGGAGAAAACGGTGGAATATATTGTACAGATTCAATTCAGAGGGTGTTTAACCCCCAGGACCTTCAGGCACTTGGTACTGAGAGTCAGAAACTGGTATCTGCAGCTGGGGGCTCCGGCACTTTGGCACCAGAAATTTCACACTTGGAGGACTCTACCTTGAAGGTTGGAAAACTTTCTGTTGAGCAGAGGAAGGAAAAGATTCATAGATACATGAAGAAGAGAAATGAAAGAAACTTCAGCAAGAAAATCAAGTATGCTTGCCGCAAAACTTTGGCAGATAGCAGGCCCCGGGTCAGAGGAAGGTTTGCAAAGAATGATGACTTTGGAGAGGGCCATAGACAAGGAAGTAGCAACCATGAAGAAGATGATGAAGAGATAAATGTGAAAGAAGATGATGATATGGTTGATTCCTCAGATATCTTTGCACATATCAGTGGAGTGAACTCTTTCAAATGCAACTATTCCATCCAGTCCTTGATTTGA 1272 0.4489 MLQDVIQPPTPDEQLPIDEISSPISARIFELCDPDFFPDTLQNSEVTSSSNCCHEEKSSYATTISPPLDVVDNKININSNSNIVTTSSSTTTASTTTNNNINNNNTTNSNNLSIFFDSQDEIDNDISASIDFSSSPSFGVPPLLAITTQQDQFDFSSAQPQVQLSAAGSVLKGLAQYPTDPVVAPLIGAPLASVFDDDCISSIPSYLPLNPSSPSCSYLGPGIGAYMPPPGSLTTALSAESSGLFGANILLGSELQTQELDYQGENGGIYCTDSIQRVFNPQDLQALGTESQKLVSAAGGSGTLAPEISHLEDSTLKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGEGHRQGSSNHEEDDEEINVKEDDDMVDSSDIFAHISGVNSFKCNYSIQSLI 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00080 423 MobiDBLite consensus disorder prediction 361 386 - -
Phco6g00080 423 ProSiteProfiles CCT domain profile. 326 368 IPR010402 GO:0005515
Phco6g00080 423 Pfam CCT motif 326 368 IPR010402 GO:0005515
Phco6g00080 423 MobiDBLite consensus disorder prediction 361 390 - -
Phco6g00080 423 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 211 389 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00080 Phco-Chr6 765349 769548 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phco6g00080 CCT 5.6e-19 CL0281