Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco6g00037 | ATGGAAACTACAAGGCGGTGGTTTAGTAAGTTCAAGGGAAATGATAAATTGAAGTCTGCAAAAGAAACTACTGGCGTGACCAAAGAAGGGCCAAAGCCCCCAACGAATGAAGAAGCACCTTCAAATGTAACCAAACAGAAGGTTGAAGCTGCAAAGCAGTATATTGAAAATCATTACAAGAAGCAGATGCAAAGCCTGCAGGAGAGGAAGGAAAGACGTAATATGCTAGAAAAGAAGTTGGCAGATGCTGAAGTGTCTGAGGAAGAGCAACACAACTTGCTTCAGTATTTGGAGAAAAAGGAGAGGGAGTACATGCGGCTTCAGAGACATAAGATGGGGGCTGATGACTTTGAGCCGCTGACTATGATTGGGAAGGGTGCATTTGGAGAGGTTAGAGTCTGCCGGGAGAAGGCCACTGGCCATGTATATGCTATGAAGAAGCTTAAGAAATCAGAGATGCTTCGTCGAGGCCAGGTTGAACATGTCAAAGCTGAGAGAAACCTACTTGCTGAAGTTGACAGCAATTGCATTGTTAAACTTTATTGTTCCTTTCAAGATGAGGAATATTTATATCTCATAATGGAGTATCTACCTGGTGGAGATATGATGACATTGCTGATGCGGAAGGAAATACTGACTGAAGATGAAGCCAGATTCTATGTTGGGGAGACTGTCCTAGCCATAGAGTCAATTCATAAACATAATTATATTCATAGAGATATCAAGCCTGACAACTTGCTCCTAGATAGACATGGTCACATGAAATTATCAGATTTTGGATTATGTAAACCGCTAGACTGCAGAAATCTTCAAGAAAAAGACTTTTCTGTTGGAGTTAACCGAAGTGGAACCCTCCAAAGTGATGGACGACCAGTGGCTCCCAAACGAACTCAACAGGAACAACTACAGCATTGGCAGAAAAATCGACGAATGCTTGCCTATTCTACAGTTGGAACTCCTGATTATATTGCTCCAGAAGTTCTGCTGAAGAAAGGATATGGCGTGGAATGTGATTGGTGGTCTCTAGGAGCTATAATGTATGAAATGCTTGTGGGGTATCCGCCCTTTTACTCAGATGAACCAATGTTGACCTGTAGAAAGATAGTAAATTGGAGAACTAATTTGAAATTTCCAGAAGAAGCTAAACTTTCAGCAGAGGCAAAAGATCTTATTTGTAGACTCCTATGTAATGTGGAGCAGAGGCTTGGAACCAAAGGAGCTGATGAAATAAAGGCCCATCCATGGTTCAAAGGCATCGAATGGGACAAACTGTACATAATGAAAGCTGCTTTCATACCTGAGGTCAATGATGAATTAGATACTCAAAACTTTGAGAAGTTTGAAGAGGTAGACAAGCAAACTGTAGCTTCCTCAAAGGCAGGGCCCTGGAGAAAGATGCTGCCATCTAAAGATGTTAACTTCGTTGGCTACACATACAAGAATTTTGAAATCTTAAATGATCATATACCAGGAATTGCTGAATTGAAGAAGAAGAACACAAAACCTAAAAGACCATCTATTAAGGCCCTATTTGATGATGAATCATCTGTGGCTGCCAATCAACCTGTGAGAGGGAGCTTCTTAAACCTCTTACCTCCTCAAATGGAAGTTCCTGAAAAAAGTGAATCACAATGA | 1635 | 0.4116 | METTRRWFSKFKGNDKLKSAKETTGVTKEGPKPPTNEEAPSNVTKQKVEAAKQYIENHYKKQMQSLQERKERRNMLEKKLADAEVSEEEQHNLLQYLEKKEREYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKEILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRHGHMKLSDFGLCKPLDCRNLQEKDFSVGVNRSGTLQSDGRPVAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDEPMLTCRKIVNWRTNLKFPEEAKLSAEAKDLICRLLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYIMKAAFIPEVNDELDTQNFEKFEEVDKQTVASSKAGPWRKMLPSKDVNFVGYTYKNFEILNDHIPGIAELKKKNTKPKRPSIKALFDDESSVAANQPVRGSFLNLLPPQMEVPEKSESQ | 544 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco6g00037 | 544 | SUPERFAMILY | Protein kinase-like (PK-like) | 96 | 463 | IPR011009 | - | |
| Phco6g00037 | 544 | ProSitePatterns | Protein kinases ATP-binding region signature. | 123 | 146 | IPR017441 | GO:0005524 | |
| Phco6g00037 | 544 | ProSiteProfiles | Protein kinase domain profile. | 117 | 416 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Phco6g00037 | 544 | Gene3D | Phosphorylase Kinase; domain 1 | 107 | 202 | - | - | |
| Phco6g00037 | 544 | CDD | MobB_NDR_LATS-like | 51 | 112 | - | - | |
| Phco6g00037 | 544 | FunFam | Non-specific serine/threonine protein kinase | 88 | 200 | - | - | |
| Phco6g00037 | 544 | SMART | serkin_6 | 117 | 416 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Phco6g00037 | 544 | Pfam | Protein kinase domain | 119 | 416 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Phco6g00037 | 544 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 417 | 489 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
| Phco6g00037 | 544 | FunFam | Non-specific serine/threonine protein kinase | 315 | 434 | - | - | |
| Phco6g00037 | 544 | Gene3D | Transferase(Phosphotransferase) domain 1 | 203 | 433 | - | - | |
| Phco6g00037 | 544 | CDD | STKc_NDR_like | 115 | 480 | - | - | |
| Phco6g00037 | 544 | Pfam | Protein kinase C terminal domain | 435 | 479 | IPR017892 | GO:0004674|GO:0005524|GO:0006468 | |
| Phco6g00037 | 544 | Coils | Coil | 59 | 86 | - | - | |
| Phco6g00037 | 544 | FunFam | Non-specific serine/threonine protein kinase | 201 | 268 | - | - | |
| Phco6g00037 | 544 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 35 | 459 | - | - | |
| Phco6g00037 | 544 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - | |
| Phco6g00037 | 544 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 236 | 248 | IPR008271 | GO:0004672|GO:0006468 | |
| Phco6g00037 | 544 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Phco6g00037 | 544 | SMART | pkinase_C_6 | 417 | 481 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco6g00037 | Phco-Chr6 | 418495 | 427226 | Dispersed/Wgd |
Transcription factors information