Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g00016 ATGACCAACCTCTTTTACAATAATGTGTTAAACTATGCACATCTCTCAGACCTTTACAACAACACAGGTCCAAAAGGATGCAAGTTGTGCAGACAAGTTTTCACTAACACTCAAGCCCTGCTAATCCATCTTGAGTCTCACATGGCACAAGAAGAAATAGCCATTAGAAGACTCTATTCATTACCACAATATGTGAATTCTCAAAAACAACTCCCTCTGCAACCTATGGCTGATGGTAGAATTTTTCAATCAATTGGAAGAAATCCATTTTCCAATGCTAGCCAAATTGGTTCTTCTTCCATGTCAATTAGGAGAATGCAAGTTCCAGCACAATATGATGCATGTATGAATGATGATGGATCTAAGGCTTATATCTTGAAGTTGGAGAAACCCATCAAACACATTGATTTCATTGATTTGGTTAACACAGATGAAGACAACAACTCCCTGCAACAACTAGATTTGGATTTAAAGCTCTAG 480 0.375 MTNLFYNNVLNYAHLSDLYNNTGPKGCKLCRQVFTNTQALLIHLESHMAQEEIAIRRLYSLPQYVNSQKQLPLQPMADGRIFQSIGRNPFSNASQIGSSSMSIRRMQVPAQYDACMNDDGSKAYILKLEKPIKHIDFIDLVNTDEDNNSLQQLDLDLKL 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g00016 159 ProSiteProfiles Zinc finger C2H2 type domain profile. 25 52 IPR013087 -
Phco6g00016 159 ProSitePatterns Zinc finger C2H2 type domain signature. 27 47 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g00016 Phco-Chr6 179961 180440 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco6g00016 None None None