Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01915 ATGTCATGCGTGGACTTCCCAGACTCAGATACAGAAATATCTTTTGTAAGCTCTGATAGGCCAAGCAGTGGTCGTTCATCCTCCGTTTATGACTATTTTGAGGCTGGCCGAACTTCGCTTGGTTCTACCAGTTCAGATCATAGTTTTGGATCAACCCGATTGGGACTCAAGTTCAATGACCCCAGTTCTCCCCTTATTTCAGTCTCTCATGAAAGCAGTAGAACATCATTCTCTTATTCATCACAAAGCATGGATGAAGAAGCAGAAGCTGATATCAGGAGGCTGAAGCTTCAGGTAGAGCAATCGATGGAGATGTACAGTGCAGCATGCAGAGAAGCACTAACAGCCCAGCAGAAGTTAACGGAGTTGACCCACCGGAGAATTGAGGAAAAACAAAAATTAGAAGAGGCACAATTGGCTCAGGAAGCTGCGCTGGCAATTGCAGAGCAAGAGAAAGCGAGATGTCGAGCAGCCACGGAAACTGCTGAAGCATCGAAGAAAATTGCTGCGATTGAAACACACAGAAGAGCGAGTGTTGAAGTTAAAGCTCTTAAAGAAGCAGAGAAGATGAGGAAGCTTTTGGACAATCTCACCCAAACTGATGCAAGATATAGAAGGTACAGTATAGAGCAGATTGAAGCAGCTACGAACTTCTTTGCTGAATCCCTGAAAATCGGGGAAGGAGGTTATGGCCCTGTTTTTAAATGTTTCCTTGATCACACTCCAGTTGCTGTCAAGGTTCTACGTCCAGATGCTGCTCAAGGGAAGTCACAGTTTCAGCAAGAGCCAATTCCCAATGATCTGAAACCAGGCAACATTTTGCTAGACCAGAATTATGTGAGTAAGATAAGCGATGTTGGATTGGCAAGGCTTGTCCCAGAAGTAGCCGAAAACGTAACACAATGCTGCATGACATCAGCAGCTGGAACATTTTGTTATATTGATCCTGAGTATCAGCAAACAGGAATGCTTGGCGTGAAGTCGGATGTTTACTCTCTTGGAATAATTTTCCTTCAACTATTGACAGGAAGAACTCCAATGGGATTAGCTTACCGTGCTGGAGAAGCTATAGAGAATGACACCTTTGAGGAAATGCTGGACCCATCCGTAACCGATTGGCCTCTTCAACAAGTCGTGTGCCTTGCAAACATAGCAGTCAAGTGTGCGGAACTCAGGCGAAAAGACAGGCCAGACCTTGCCAAAGTGGTGCTGCCAGAGCTTGATAAATTGAGAGACTTTGCCGAAGAAAACATGACAGTGCAGTCGTTGCCCATCATTTTAGGATGCATTGCGCCTTCACCTTCCCACAGTGAAACTTCTGTGCAACAGGATGGGATGAGCGACCCGCGCTTTGTACATTCCGTAGGGTCATCAGCTCCATCAACGCCCACAGAAGGAAAACCTTAA 1407 0.457 MSCVDFPDSDTEISFVSSDRPSSGRSSSVYDYFEAGRTSLGSTSSDHSFGSTRLGLKFNDPSSPLISVSHESSRTSFSYSSQSMDEEAEADIRRLKLQVEQSMEMYSAACREALTAQQKLTELTHRRIEEKQKLEEAQLAQEAALAIAEQEKARCRAATETAEASKKIAAIETHRRASVEVKALKEAEKMRKLLDNLTQTDARYRRYSIEQIEAATNFFAESLKIGEGGYGPVFKCFLDHTPVAVKVLRPDAAQGKSQFQQEPIPNDLKPGNILLDQNYVSKISDVGLARLVPEVAENVTQCCMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIIFLQLLTGRTPMGLAYRAGEAIENDTFEEMLDPSVTDWPLQQVVCLANIAVKCAELRRKDRPDLAKVVLPELDKLRDFAEENMTVQSLPIILGCIAPSPSHSETSVQQDGMSDPRFVHSVGSSAPSTPTEGKP 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01915 468 MobiDBLite consensus disorder prediction 435 468 - -
Phco5g01915 468 SUPERFAMILY Protein kinase-like (PK-like) 204 418 IPR011009 -
Phco5g01915 468 MobiDBLite consensus disorder prediction 1 28 - -
Phco5g01915 468 PANTHER OS02G0152300 PROTEIN 266 444 - -
Phco5g01915 468 MobiDBLite consensus disorder prediction 11 28 - -
Phco5g01915 468 Pfam Protein kinase domain 266 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g01915 468 Gene3D Phosphorylase Kinase; domain 1 189 259 - -
Phco5g01915 468 Coils Coil 120 151 - -
Phco5g01915 468 ProSiteProfiles Protein kinase domain profile. 134 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g01915 468 Coils Coil 85 105 - -
Phco5g01915 468 SMART serkin_6 219 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g01915 468 MobiDBLite consensus disorder prediction 454 468 - -
Phco5g01915 468 Gene3D Transferase(Phosphotransferase) domain 1 260 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01915 Phco-Chr5 55114021 55116131 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Phco5g01915 Pkinase 2.2e-16 CL0016