Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01833 ATGTCTGGGTTGGAGGAATTGAGGAAAAAACTTGCACCTTTATTCGATGCCGAGAAGGGTTTCTCATCAAGTTCAACCTTGGACCCCTGTGATTCTTACACATTCTGGGATGGTGGAACTGTGAACTTGTTGAGTAGATCATATGGGGTGTACAATATCAACGAGCTTGGGTTGCAGAAGTGCACATCATCAAGGTCTTTGGATGTAACTGATCAGAGTGAGAAAACGTACAAGTGTGCTTCCCAAGAAATGAGGATATTTGGAGCAATTGGTAGTGGTGCCAGTAGTGTTGTGCAGAGAGCCATGCATATACCAACACATAGGATTCTGGCGCTGAAGAAGATCAATATCTTTGAGAAGGAGAAAAGGCAGCAGCTCCTTACTGAGATAAGGACATTATGTGAAGCACCTTGTTATGAGGGTCTTGTAGAATTTCATGGAGCATTTTACACCCCAGATTCTGGACAGATAAGCATAGCTTTGGAGTATATGGATGGAGGATCACTTGCAGATATCTTGCGAATGAATAGAAGGATACCTGAACCTATTCTATCGTTCATGTTTCAGAAGCTCCTACACGGTCTAAGCTATCTGCATGGAGTCAGACATCTAGTTCACAGAGACATAAAGCCTGCCAATCTATTGGTAAATTTGAAGGGAGAGCCAAAAATTACTGATTTTGGTATTAGTGCTGGCTTAGAGAATTCAGTGGCAATGTGTGCTACATTTGTTGGAACTGTTACATACATGTCACCTGAGAGGATTTGA 768 0.4219 MSGLEELRKKLAPLFDAEKGFSSSSTLDPCDSYTFWDGGTVNLLSRSYGVYNINELGLQKCTSSRSLDVTDQSEKTYKCASQEMRIFGAIGSGASSVVQRAMHIPTHRILALKKINIFEKEKRQQLLTEIRTLCEAPCYEGLVEFHGAFYTPDSGQISIALEYMDGGSLADILRMNRRIPEPILSFMFQKLLHGLSYLHGVRHLVHRDIKPANLLVNLKGEPKITDFGISAGLENSVAMCATFVGTVTYMSPERI 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01833 255 SMART serkin_6 84 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g01833 255 Gene3D Transferase(Phosphotransferase) domain 1 166 255 - -
Phco5g01833 255 ProSitePatterns Protein kinases ATP-binding region signature. 90 113 IPR017441 GO:0005524
Phco5g01833 255 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Phco5g01833 255 Pfam Protein kinase domain 88 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g01833 255 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 33 255 - -
Phco5g01833 255 FunFam mitogen-activated protein kinase kinase 3 56 165 - -
Phco5g01833 255 SUPERFAMILY Protein kinase-like (PK-like) 86 255 IPR011009 -
Phco5g01833 255 Gene3D Phosphorylase Kinase; domain 1 51 165 - -
Phco5g01833 255 ProSiteProfiles Protein kinase domain profile. 84 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01833 Phco-Chr5 54427524 54429148 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Phco5g01833 Pkinase 2.3e-38 CL0016