Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01807 ATGGAGCATGTTTTGGAAAAAAGATTCCCTCTTAATGCAGAAGATTACAAGTTATATGAAGAAGTTGGTGAAGGCGTTAGTGCCTCTGTATACAGGGCTCTTTGCGTTCCTCTCAACGAGATAGTTGCAATCAAGGTTCTCGATCTAGAGAAGTGCAATAATGATTTGGATGGCATTAGAAGAGAGGTACAGACCATGAGCTTGATTGATCATCCAAATGTTTTACAGGCACATTGCTCTTTTACTGCTGGACACAATCTATGGGTTGTAATGCCATACATGGCAGGGGGTTCTTGCCTTCATATAATGAAATCTGCCTATCCTGAGGGGTTTGAAGAGCCTGTTATTGCTACTTTATTGCATGAAGTTCTCAAAGCTCTTGTTTATCTTCATGCCCATGGTCACATACATAGAGATGTTAAGGCTGGGAATATTCTGTTAGATTCTAATGGTGCAGTCAAACTGGCTGACTTTGGAGTGTCAGCATGTATGTTTGATACTGGAGACAGGCAACGTTCAAGAAACACTTTTGTTGGAACACCTTGCTGGATGGCTCCCGAAGTCATGCAGCAATTACATGGATATGATTTTAAAGCAGATATATGGTCATTTGGTATAACAGCACTTGAACTTGCTCATGGTCATGCCCCGTTTTCCAAGTATCCACCTATGAAAGTTTTGCTTATGACTTTACAAAATGCCCCTCCAGGTCTTGATTATGAAAGAGATAAGAGATTTTCAAAGGCTTTCAAGGAGTTGGTTGCCACCTGCTTAGTAAAAGACCCAAAAAAGCGTCCTAGTTCAGAAAAGCTATTAAAGCACCACTTCTTTAGACATGCACGTGCTAGCAAATATCTATCTCGCACCATTCTAGATGGCCTTGCTCCTTTAGGAGATCGTTTTAGAACGCTGAAGGCTAAAGAGGCAGATTTATTGGTGCAGAACAAGGCTCTTTATGAGGATAAGGATCAGTTATCTCAGAAAGAATATATTCGAGGAATCAGTGCCTGGAATTTTAACCTGGAAGATTTAAAAAGTCAAGCTGCTCTTATTCAAGATGATGACATACCTAATGAAGATGAGCCACAAAAGGATAAGAAGCAAAGAGACACATTGAATGACTTCAGGGATCCTGCAGAGAGGTTAACATCTGTAACAGCTAATCATTCAGATGGTGCACCCACTCAGAACAAGGAGGATGGATTCAATAATCTTCAGGATTTGGAGGGATCGCTTGCCTCATTTCCTAGTAAACCTCTTCAAGCACTTAAAGGATGTTTTGATATGTGTGAGGACGACGTTAATAACAACAGTCCAAGAGATCTGGATCATGATTATGGAAATGAAAGTTCTGGGCCAAGTTCTTCATTACAACAAAACGCCAACAATCAGCAAAAAAGGTTTTTGAGTGGTTCTTTGCTACCTGATAATTTTCTTTTTCCCAAAAAGGTTGTTACTGATGGGGACAGGGATTACCTACAAACAAAGTATTCTTCGGAGAGGAATCACAGTGGTCCATTGCAATATCGACAGAAGAGAGATACCAACAACCTTCCATTGGTTGATGACACATCAGATGGAGCATTTGTCCAGCGTAGGGGGCGGTTTAAGGTCACATCGGCAGATCTCAGTCCAATGGGTCCTTCAAACAGTGCTTCTGGTCCAGTTGTTAGTCCTACCAGTCCACCAAATCAAATTTTCATGGCTGGCGCCATTCTTCCATCGCTGCAGTGCATCTTGCAACAGAATGGTTTGCAGAGGGAAGAGATTATAAAATTAATAAAGTATGCAGAGCAATCTTCTGGTAAGAATGCAGAATCAGTGGAGGCAGGGGCAGTTGATAGTTTGCAGGTACCTGCAACAACCAGGGAGAGGGAGCTGCATTTTCAGGTGATTCAACTCCAACAGAGCGTTGGAAGCCTTGTTGAGGAATTACAAAGGCAAAAGATGAAAAATGTTCAGTTAGAGAAACAGTTGAGCAGTATGAATAACAAAGTGGAGAAGTGA 2007 0.4145 MEHVLEKRFPLNAEDYKLYEEVGEGVSASVYRALCVPLNEIVAIKVLDLEKCNNDLDGIRREVQTMSLIDHPNVLQAHCSFTAGHNLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLHEVLKALVYLHAHGHIHRDVKAGNILLDSNGAVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKAFKELVATCLVKDPKKRPSSEKLLKHHFFRHARASKYLSRTILDGLAPLGDRFRTLKAKEADLLVQNKALYEDKDQLSQKEYIRGISAWNFNLEDLKSQAALIQDDDIPNEDEPQKDKKQRDTLNDFRDPAERLTSVTANHSDGAPTQNKEDGFNNLQDLEGSLASFPSKPLQALKGCFDMCEDDVNNNSPRDLDHDYGNESSGPSSSLQQNANNQQKRFLSGSLLPDNFLFPKKVVTDGDRDYLQTKYSSERNHSGPLQYRQKRDTNNLPLVDDTSDGAFVQRRGRFKVTSADLSPMGPSNSASGPVVSPTSPPNQIFMAGAILPSLQCILQQNGLQREEIIKLIKYAEQSSGKNAESVEAGAVDSLQVPATTRERELHFQVIQLQQSVGSLVEELQRQKMKNVQLEKQLSSMNNKVEK 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01807 668 MobiDBLite consensus disorder prediction 383 404 - -
Phco5g01807 668 MobiDBLite consensus disorder prediction 543 559 - -
Phco5g01807 668 FunFam serine/threonine-protein kinase BLUS1 isoform X1 97 330 - -
Phco5g01807 668 MobiDBLite consensus disorder prediction 437 463 - -
Phco5g01807 668 Coils Coil 638 668 - -
Phco5g01807 668 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Phco5g01807 668 MobiDBLite consensus disorder prediction 448 463 - -
Phco5g01807 668 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g01807 668 MobiDBLite consensus disorder prediction 540 559 - -
Phco5g01807 668 SUPERFAMILY Protein kinase-like (PK-like) 13 278 IPR011009 -
Phco5g01807 668 FunFam Serine/threonine-protein kinase BLUS1 5 93 - -
Phco5g01807 668 MobiDBLite consensus disorder prediction 357 377 - -
Phco5g01807 668 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Phco5g01807 668 Gene3D Transferase(Phosphotransferase) domain 1 97 314 - -
Phco5g01807 668 MobiDBLite consensus disorder prediction 353 404 - -
Phco5g01807 668 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g01807 668 CDD STKc_OSR1_SPAK 14 277 - -
Phco5g01807 668 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g01807 668 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 7 649 IPR047173 GO:0043539
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01807 Phco-Chr5 54200619 54208761 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Phco5g01807 Pkinase 5.8e-59 CL0016