Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01779 ATGAAGAAGAGTGAGAGTGGGGGGTATGTGAGAGCGGATCAGATAGATCTGAAGAGCTTGGATGAGCAGCTTCAGAGGCATCTGAGTAGAGCGTGGACTATGGAGAAGAACAAGGAGAAGGAGGAAGAGGAGGTTGAAGGAAGGTCCACAAGAAGCAGACAAGAGTGGGAGATCGACCCCTCTAAGCTTGTCATCAAGACTGTCATTGCCCGTGGCACTTTTGGCACAGTTCATCGTGGGATTTATGATGGACAAGATGTTGCAGTTAAGCTCCTTGACTGGGGGGAAGAGGGACATCGATCAGATGCTGAAATAGCTTCTTTGAGAGCGGCGTTTACTCAAGAAGTTGCCGTTTGGCACAAGCTTGACCATCCTAATGTAACCAAGTTTCTTGGGGCAACAATGGGAACATCAGAGCTACAGATACAAACAGAAAATGGTCATATAGGCATGCCAAGTAATGTTTGTTGTGTTGTTGTTGAATATTGTCCTGGAGGTGCACTGAAGACTTATCTTATTAAAAACCGAAGAAGGAAGCTGGCTTTTAAAGTGGTTGTTCAACTGGCTCTTGACCTTGCAAGAGGGTTGAGCTATCTCCACACAAAGAAGATTGTCCACAGAGATGTTAAAACAGAAAATATGCTTCTGGACAAGACACGAACCTTGAAAATAGCTGATTTTGGAGTGGCTCGTATTGAGGCTTCCAATCCTCATGACATGACAGGTGAAACTGGAACCCTTGGTTACATGGCTCCTGAGGTTCTAAATGGTAATCCATACAATAGAAAGTGTGACGTGTACAGTTTCGGCATATGCTTATGGGAGATATACTGCTGTGACATGCCATATCCGGACCTTAGCTTCTCTGAAGTGACGTCAGCTGTAGTACGGCAGAATCTGAGGCCAGAGATTCCACGATGTTGTCCTAGCTCTCTGGCAAATGTGATGAAAAGATGCTGGGATGCCAATCCTGATAAGAGGCCAGAGATGGATGAAGTAGTGTCCATGTTGGAAGCTATTGACACTTCAAAGGGTGGAGGTATGATCCCTGTTGATCAGCCTCAAGGTTGTTTATGTTTTCGCAGCTATCGAGGACCTTGA 1101 0.455 MKKSESGGYVRADQIDLKSLDEQLQRHLSRAWTMEKNKEKEEEEVEGRSTRSRQEWEIDPSKLVIKTVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSDAEIASLRAAFTQEVAVWHKLDHPNVTKFLGATMGTSELQIQTENGHIGMPSNVCCVVVEYCPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHTKKIVHRDVKTENMLLDKTRTLKIADFGVARIEASNPHDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPVDQPQGCLCFRSYRGP 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01779 366 FunFam Serine/threonine-protein kinase HT1 163 348 - -
Phco5g01779 366 Gene3D Phosphorylase Kinase; domain 1 51 146 - -
Phco5g01779 366 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 54 340 - -
Phco5g01779 366 Gene3D Transferase(Phosphotransferase) domain 1 163 349 - -
Phco5g01779 366 FunFam Kinase suppressor of Ras 1 52 147 - -
Phco5g01779 366 CDD STKc_MAP3K-like 69 337 - -
Phco5g01779 366 PRINTS Tyrosine kinase catalytic domain signature 160 173 IPR001245 GO:0004672|GO:0006468
Phco5g01779 366 PRINTS Tyrosine kinase catalytic domain signature 308 330 IPR001245 GO:0004672|GO:0006468
Phco5g01779 366 PRINTS Tyrosine kinase catalytic domain signature 198 216 IPR001245 GO:0004672|GO:0006468
Phco5g01779 366 PRINTS Tyrosine kinase catalytic domain signature 264 286 IPR001245 GO:0004672|GO:0006468
Phco5g01779 366 MobiDBLite consensus disorder prediction 31 53 - -
Phco5g01779 366 Coils Coil 24 44 - -
Phco5g01779 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Phco5g01779 366 ProSiteProfiles Protein kinase domain profile. 63 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g01779 366 Pfam Protein tyrosine and serine/threonine kinase 64 337 IPR001245 GO:0004672|GO:0006468
Phco5g01779 366 PIRSF ILK 12 346 - -
Phco5g01779 366 SUPERFAMILY Protein kinase-like (PK-like) 45 337 IPR011009 -
Phco5g01779 366 SMART serkin_6 63 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01779 Phco-Chr5 53853427 53857376 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Phco5g01779 PK_Tyr_Ser-Thr 6.5e-64 CL0016