Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01703 ATGGATCGCAGGAATACGTTTTTCTCTTCCTTCCTTATGCTAACCCTGTTGGGGTTTCACGTGTTTCTCGCTTCGTCGCAGGAGGACGACGTTAGATGTCTCCGTGGCATCAAAGAAGCTCTTTCGGATCCACAGGGCCACCTCTCCCTGTGGCGGTTCGAGAACACCACCGTGGGTTTCATCTGCGACTTCGTGGGTGTGACTTGCTGGAACCAAAGGGAGAACCGGGTCTTGAGTTTGGACTTCCAAGATTTCAAACTTTCGGGTCGGATCCCCGAGGCTTTGAAGTACTGTGGGAAGAGCCTTCAGAGGTTGAATCTTGCTTCAAACTCTTTCTCCTCCGAGATCCCACACGAGATCTGTAGTTGGATGCCCTTTTTGGTTTCTCTAGATTTGTCTGGTAATCAACTCTCTGGGCCTATTCCTCCCACACTTGCGAATTGTTCATATTTGAATGAGTTGATGTTGTCAGATAATCAGCTTTCTGGGTCAATTCCCTTTGAGTTGGGGAGTTTGAGTAGGCTCAAGAAGTTTTCTGTGGCCAATAATAGGCTTAGTGGGACAATTCCTGAGTTTTTCCATGGGTTTGAAAGGGAGGGCTTTGAGGGGAATAGTGGCTTATGTGGGGGTCCTCTTGGATCCAAGTGTGGTGGGATGAGTAAGAAAAATCTTGCTATTATTATTGCTGCTGGGGTGTTTGGTGCTGCTGCTTCGTTGTTGCTGGCTTTTGGCCTGTGGTGGTGGTACCATTTAAGCGGGAAGAGGAAGAAGAAGGGGTATGGGATTGGTTCTAGCGTGGGTGCTGCTGGTGATTGGGCTTTGAGGTTAAGAGGGTATAAGCTAGTGCAAGTTAGTCTCTTTCAGAAGCCTATTGTGAAGGTGAAGTTGGGGGATTTGATGGCTGCTACTAATAATTTCAGTGGGGAGAATGTTCTTTTTGCAACAAGAACCGGGACAACGTATAAGGCTGATCTCCCAGATGGTTCCACGCTTGCAGTGAAGAGGTTGAATGCTTGTAGGATTGGGGAGAAGCAATTTGGGATGGAGATGAACCGGTTGGGGCAGGTTAGGCACCCGAATCTGGCTCCTCTGTTGGGGTACTGTGTGGTGGAGGAGGAGAAGTTGTTGGTTTACAAGCACATGTCTAATGGGACTTTGTATTCCTTGTTGCACAAGAATGGTGGGGTGCTGGGTTGGATGATGAGGTTTAGGATTGGATTAGGCGCGGCAAGGGGGCTTGCATGGCTGCATCATGGCTGCCACCCTCCCATCATACAGCAGAACATTTGCTCTAATGTCATTCTTGTTGATGAGGAGTTTGATGCTCGGTTGATGGACTTTGGGTTGGCAAGGCTCATGGCTTCAGACTCAAATGGTAGTTTTGTGAATGGAGATTTGGGGGAGATTGGTTACATCGCCCCGGAGTATCCAAGTACTTTGGTTGCTTCATTGAAAGGGGATGTGTATGGTTTTGGTGTTTTGCTTTTGGAGTTGGTGACAGGCCAAAAACCACTTTATGTGAGCAATGGGGAGGAAGATTTCAAGGGTAGCTTGGTGGATTGGGTGAACATGCATTCTAGTTTGGGAAGGATGAAGGATTGCATTGATAAAGCCATATGTGGAAGGGGGCATGATGAGGAGATTCTGCAGTTTCTGAAAATTGCTTTGAATTGTGTGGTTTCTCGTCCCAAGGATAGGTGGTCTATGTACCAGGTTTATCATTCCTTAAAGGGGTTATCAAAAGACCAGAGTTTCTTTGAACATGATGATGACTTTCCCCTGATCTTTGGTAAGCCAGAAAACGAGGCAGCGTAG 1815 0.4738 MDRRNTFFSSFLMLTLLGFHVFLASSQEDDVRCLRGIKEALSDPQGHLSLWRFENTTVGFICDFVGVTCWNQRENRVLSLDFQDFKLSGRIPEALKYCGKSLQRLNLASNSFSSEIPHEICSWMPFLVSLDLSGNQLSGPIPPTLANCSYLNELMLSDNQLSGSIPFELGSLSRLKKFSVANNRLSGTIPEFFHGFEREGFEGNSGLCGGPLGSKCGGMSKKNLAIIIAAGVFGAAASLLLAFGLWWWYHLSGKRKKKGYGIGSSVGAAGDWALRLRGYKLVQVSLFQKPIVKVKLGDLMAATNNFSGENVLFATRTGTTYKADLPDGSTLAVKRLNACRIGEKQFGMEMNRLGQVRHPNLAPLLGYCVVEEEKLLVYKHMSNGTLYSLLHKNGGVLGWMMRFRIGLGAARGLAWLHHGCHPPIIQQNICSNVILVDEEFDARLMDFGLARLMASDSNGSFVNGDLGEIGYIAPEYPSTLVASLKGDVYGFGVLLLELVTGQKPLYVSNGEEDFKGSLVDWVNMHSSLGRMKDCIDKAICGRGHDEEILQFLKIALNCVVSRPKDRWSMYQVYHSLKGLSKDQSFFEHDDDFPLIFGKPENEAA 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01703 604 SUPERFAMILY L domain-like 27 198 - -
Phco5g01703 604 ProSiteProfiles Protein kinase domain profile. 306 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g01703 604 Pfam Leucine rich repeat N-terminal domain 28 70 IPR013210 -
Phco5g01703 604 Gene3D Phosphorylase Kinase; domain 1 267 380 - -
Phco5g01703 604 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 268 380 - -
Phco5g01703 604 Gene3D Ribonuclease Inhibitor 27 218 IPR032675 -
Phco5g01703 604 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 27 217 - -
Phco5g01703 604 Pfam Protein tyrosine and serine/threonine kinase 327 521 IPR001245 GO:0004672|GO:0006468
Phco5g01703 604 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 76 193 - -
Phco5g01703 604 Gene3D Transferase(Phosphotransferase) domain 1 381 597 - -
Phco5g01703 604 SUPERFAMILY Protein kinase-like (PK-like) 283 576 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01703 Phco-Chr5 53133476 53135290 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Phco5g01703 PK_Tyr_Ser-Thr 9.6e-27 CL0016