Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01571 ATGAATAAGAAGTTTAATTTCCATCGATACATACCTATCTCTCTCTCTCTATATGAGTTTTTATTTGTCTCAATCTTTGTTCTGAATCAGATACGGACTAGGACAGCATATTTACAGTTCAAAATTAGGAGGTTGATTGTTGAGGGTGGAAGAGAAGATAGAGGAAGGAGAAGCAATTACAATAATGAAAGAAATACAATGATCAATAGTACAAAAGAAGCAGATTTTCCACTAAAACAGGAAGGTCTTTCTACAAGTGATCATGAAAAGGCAAAGGCTTCATCGAGCTCATCCTCCAAATGGTTGAAACTCAAGGATCCAAGGATTGTTCGTGTGTCTCGAGCCTTCGGAGGAAAAGACAGGCACAGCAAGGTGTTCACAGTGAGAGGACTAAGAGATAGGAGGGTGAGGCTTTCAGTCCCAACAGCAATTCATCTCTACGACCTCCAAGATAGGCTTGGACTCAGTCAACCTAGCAAGGTTGTTGATTGGTTGCTCAATGCAGCCAAGCATGAAATTGATGAACTACCGCCACTTCCAATTCCTCCAGGTAACTTCACCCTTGGTTATCCATCTCTTGTTGCTTGCAATGAAGTTAACACCTCTCGTGAAAGTTCAGGCCAAAACAGCAACACTTTATGGAAACCAAAGTCAGGAGAAATGGTCAGTGATAAAGCAAATTGGATAAATAGAAGTGAAAATGACAATAATGCTACCAAAACTAATAATAACAGTAATGACTGTGATAATAAACACTGTCATGGCGCACATGTTTTTCCAAATAATCTCTTACCAAGACCAAATCATCCTTCTTTTCTGGGCTTGATGAACACCATGCCATCACTTGGTTACCAATGGGAGCCTAATTCAGGTGATGTTCCTCAATTGGCAAACCATGGATTTTTTAACCAAACGGATGTACACAGCATTAATGTAGTTCCAATCTCATCAACTTTGGTATCAACTGGGAGTACTAGTCCTCAAATTTTGGTGTGTCCTTCTGGAGCAACACAGCCATATTTCTCTTCCCATGTTGCAGCAATGGAGATGAATGCAAGACAAATCAACCACTATCAGATGCTGACATCAGGTTCTCAAAATCTCTTGGCAAATTCTCTCACTCCATCACAACAACTCATGAGCCAATCTGGGAAAGTGCCATTCAGCTTGGTTAGGCCTAAACTTTTCCATTCTCCTAACAGCACTGAAAGCCACCCCCCTAAAGGCCAGGATTTTGCTTCCAAGTGA 1248 0.4087 MNKKFNFHRYIPISLSLYEFLFVSIFVLNQIRTRTAYLQFKIRRLIVEGGREDRGRRSNYNNERNTMINSTKEADFPLKQEGLSTSDHEKAKASSSSSSKWLKLKDPRIVRVSRAFGGKDRHSKVFTVRGLRDRRVRLSVPTAIHLYDLQDRLGLSQPSKVVDWLLNAAKHEIDELPPLPIPPGNFTLGYPSLVACNEVNTSRESSGQNSNTLWKPKSGEMVSDKANWINRSENDNNATKTNNNSNDCDNKHCHGAHVFPNNLLPRPNHPSFLGLMNTMPSLGYQWEPNSGDVPQLANHGFFNQTDVHSINVVPISSTLVSTGSTSPQILVCPSGATQPYFSSHVAAMEMNARQINHYQMLTSGSQNLLANSLTPSQQLMSQSGKVPFSLVRPKLFHSPNSTESHPPKGQDFASK 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01571 415 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 82 382 IPR005333 GO:0003700
Phco5g01571 415 ProSiteProfiles TCP domain profile. 118 176 IPR017887 -
Phco5g01571 415 Pfam TCP family transcription factor 118 243 IPR017887 -
Phco5g01571 415 MobiDBLite consensus disorder prediction 395 409 - -
Phco5g01571 415 MobiDBLite consensus disorder prediction 395 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01571 Phco-Chr5 51665514 51666761 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phco5g01571 TCP 2.7e-27 No_clan