Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco5g01559 | ATGACCATCTTCACTTTCACCCTCTTCTTCCTCCTTCTCTACTTCTGCGTACACCTCCAGGCCTACACCCCGGAGGAAATTTTCACCATCAGTTGCGGCACCACCGGCAATTCCTCCGACGGTCAAAGAAGGTGGACCGGCGACGAAGACACAAAGTACTTATCTTTCCAAGACGCCACCGCTTCAGAGAAGGCATCAACACAATCTCCTTCCACCAATCAAATCCCATACTCCAGTGCACGCTTGTCCCGTTCCCAATTCAACTACTCCTTCCCCGTCTCCCCAGGTCCCAAATTCCTTCGTCTCTTCTTCTACCCTTCCGACTACCCTTCCTTTCCCCGCAACCAAGCTTCTTTCACCCTTCAATCCAACCAATTCACTCTCCTCAACGCTTTCAACGCCTCTCTTAACGCCGACGCTCAAGCCACTCAGACTATCTTCCGAGAATACGTGGTCAACGTCAACGACGGTGAGAGGCTTATCCTCACCTTCACTCCCTCCCATCCAAACTCCTACGCTTTCATCAATGGAATCGAGGTGCTTTCCATGCCAACCGATTTATATTACACTCCACTAGATGATATAGGATTCACGCTAGTGGGACATGGTACGCTACTCAGCGTTGGAACCAGCTCTGCGCTCCAGACTGAGTATAGAATCAAATCTGGAGGCCAAGAAATCCCGCCACTAAACGACACCGGTTTGTTCAGGGATTGGGCTGACGAACAAGCTTATTTTATTAAAGAAAATCCAAAGAATAATGATCTACCAGCTGACATCGATGGGAAGATGAGCATAACCGTGAATCCCGATTACGTGGCACCCAAGGAACTGTTCAGAACAGCGCGTAGCCAGGGCACAAACTCTACTCTGAACAAAATCAGCAACCTCACTTGGGTGTTCCCTGTTGATTGTGGCTTCACTTACGTTCTCAGGCTCCACTTTTGCGAGCTTGATCCTCATATCAAGGACATCGGTGACAGACAATTCTTCATTTACATAAATAGCCAGTTGGCTGAAGATCGTGCAGATGTAATGAAATGGAGTGCGAAACAAAAGGGTCTAGCTGTGCACAGAAACTACGCCGTTATGATTCCCAAGAATGGTAATCAGAAAAAGTTTAATCTCTCGCTTCAAATGCACCCTTACCAAAGCAGTGTGGATACGGATTACAGCGACGCCTTCCTGAACGGTCTCGAGATCTTCAAAATCAGCGAAGTCAGCTCAAACAACCTAGCCGGACCCAACCCGGACCCGGTTCAGACTCCACAGAACAACAATCCCGACCAAAACGGAAAGTCGAGCAGCAGAAGTGCAACGACGATAATTGGCGTCGTAGCAGGGCTGGTGTCCGGCGTCGTTTTGATCTCGCTGATCGTTTTCCTTGTCGTGTTTTTCCGACGCAAGAGAACCACAAAGCCAAAAGATTACAAAAATTCAAAGTCTTCCGGGACTTCCAAGTGGGGTCCACTCTCCTTCGCAACGACCAAGTCAACCACCACAAACTCCTCTCTACCGTCGGATCTCTGCCGCCACTTCTCCCTCGCGGAGATCAAAGCTGCCACCAACAACTTCGACGACGTCTTCATTGTCGGAGTCGGGGGATTCGGCCACGTGTACAAGGGCTACATCGACGGCGGTTCCACCCCGGTGGCCATCAAGCGCCTGAAACCGGGTTCCCAGCAGGGTGCGCACGAGTTCATGAACGAGATCGAGATGCTCTCGCAGCTCCGCCATCTTCATCTCGTGTCCCTGATCGGATACTGCAACGAGATGAACGAGATGATCCTGGTCTACGACTTCATGGCGCGTGGCACCCTACGCGACCATCTCTACAACACCGACAACCCCGCTATCCCGTGGAAGCAGCGGTTGCAGATCTGCATCGGCGCCGCGCGTGGACTCCACTATCTCCACACTGGCGCGAAGCACACGATCATCCACCGCGACGTGAAAACCACGAACATCTTGTTGGATGATAAGTGGGTGGCCAAGGTGTCGGACTTCGGACTTTCCAGAATTGGGCCAACGGGCATGTCCAAGGCTCATGTCAGCACCGTGGTGAAGGGCAGCATGGGATACCTAGACCCAGAGTATTACAAACGACAGCGTTTGACAGAAAAGTCTGACGTGTACTCTTTCGGTGTGGTGCTGTTCGAGTTACTCTGCGCTCGTCCGCCTCTGATCCGCACGGCGGAGAAGAAACAGGTGTTACTGGCTGAATGGGCAAGACACTGTTACCAAAATGGGAGCATTGCACAGATTGTGGACCCCGCGTTGAAGGGGAGGATCGCAGCTGAGTGCTTGAAGAAGTTCTGCGAAATTGGGGTGAGTTGTTTGTTGGACGATGGAACGCAGAGGCCGTCGATGAACGACGTGGTTTGGATGCTGGAGTTTGCGTTGCAGCTACAAGAGAGTGCAGAACAGAGGGAAAATGCTAATGTTGTGGGTGGTGAAGGGGTGAATGAAAGAAGAGAGGAAGGTATGGAGGATTTGTTTAGCAGTGGAACGAGTGTGGGCCAGGTTTCTGATTTTAACAAGAGTAGTGGAACGAGTGTGGTGAGTGTTAGTAGCAGTAGCGAAGAGTATAAAGAGAGTGATAGAATAATGTCTGGAACTGTTTTCTCTGAAATTGTTGACCCAAAGCCACGTTGA | 2655 | 0.5085 | MTIFTFTLFFLLLYFCVHLQAYTPEEIFTISCGTTGNSSDGQRRWTGDEDTKYLSFQDATASEKASTQSPSTNQIPYSSARLSRSQFNYSFPVSPGPKFLRLFFYPSDYPSFPRNQASFTLQSNQFTLLNAFNASLNADAQATQTIFREYVVNVNDGERLILTFTPSHPNSYAFINGIEVLSMPTDLYYTPLDDIGFTLVGHGTLLSVGTSSALQTEYRIKSGGQEIPPLNDTGLFRDWADEQAYFIKENPKNNDLPADIDGKMSITVNPDYVAPKELFRTARSQGTNSTLNKISNLTWVFPVDCGFTYVLRLHFCELDPHIKDIGDRQFFIYINSQLAEDRADVMKWSAKQKGLAVHRNYAVMIPKNGNQKKFNLSLQMHPYQSSVDTDYSDAFLNGLEIFKISEVSSNNLAGPNPDPVQTPQNNNPDQNGKSSSRSATTIIGVVAGLVSGVVLISLIVFLVVFFRRKRTTKPKDYKNSKSSGTSKWGPLSFATTKSTTTNSSLPSDLCRHFSLAEIKAATNNFDDVFIVGVGGFGHVYKGYIDGGSTPVAIKRLKPGSQQGAHEFMNEIEMLSQLRHLHLVSLIGYCNEMNEMILVYDFMARGTLRDHLYNTDNPAIPWKQRLQICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDDKWVAKVSDFGLSRIGPTGMSKAHVSTVVKGSMGYLDPEYYKRQRLTEKSDVYSFGVVLFELLCARPPLIRTAEKKQVLLAEWARHCYQNGSIAQIVDPALKGRIAAECLKKFCEIGVSCLLDDGTQRPSMNDVVWMLEFALQLQESAEQRENANVVGGEGVNERREEGMEDLFSSGTSVGQVSDFNKSSGTSVVSVSSSSEEYKESDRIMSGTVFSEIVDPKPR | 884 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco5g01559 | 884 | Gene3D | - | 24 | 184 | - | - | |
| Phco5g01559 | 884 | Gene3D | - | 213 | 405 | - | - | |
| Phco5g01559 | 884 | ProSitePatterns | Protein kinases ATP-binding region signature. | 531 | 554 | IPR017441 | GO:0005524 | |
| Phco5g01559 | 884 | PANTHER | OS03G0124300 PROTEIN-RELATED | 4 | 478 | IPR046957 | GO:0004672 | |
| Phco5g01559 | 884 | FunFam | Receptor-like protein kinase FERONIA | 497 | 601 | - | - | |
| Phco5g01559 | 884 | MobiDBLite | consensus disorder prediction | 412 | 436 | - | - | |
| Phco5g01559 | 884 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 646 | 658 | IPR008271 | GO:0004672|GO:0006468 | |
| Phco5g01559 | 884 | MobiDBLite | consensus disorder prediction | 834 | 860 | - | - | |
| Phco5g01559 | 884 | FunFam | Receptor-like protein kinase FERONIA | 602 | 817 | - | - | |
| Phco5g01559 | 884 | Pfam | Protein tyrosine and serine/threonine kinase | 531 | 795 | IPR001245 | GO:0004672|GO:0006468 | |
| Phco5g01559 | 884 | Pfam | Malectin-like domain | 30 | 404 | IPR024788 | - | |
| Phco5g01559 | 884 | ProSiteProfiles | Protein kinase domain profile. | 525 | 800 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Phco5g01559 | 884 | CDD | STKc_IRAK | 531 | 798 | - | - | |
| Phco5g01559 | 884 | FunFam | FERONIA receptor-like kinase | 27 | 184 | - | - | |
| Phco5g01559 | 884 | FunFam | FERONIA receptor-like kinase | 212 | 405 | - | - | |
| Phco5g01559 | 884 | MobiDBLite | consensus disorder prediction | 833 | 862 | - | - | |
| Phco5g01559 | 884 | SMART | serkin_6 | 525 | 800 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Phco5g01559 | 884 | SUPERFAMILY | Protein kinase-like (PK-like) | 500 | 800 | IPR011009 | - | |
| Phco5g01559 | 884 | Gene3D | Phosphorylase Kinase; domain 1 | 490 | 601 | - | - | |
| Phco5g01559 | 884 | Gene3D | Transferase(Phosphotransferase) domain 1 | 602 | 822 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco5g01559 | Phco-Chr5 | 51525193 | 51527847 | Dispersed/Proximal |
Transcription factors information