Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01556 ATGACCTCCCTCACTTTCACCACCTCCTTAACACTCTTTTTCCTCCTTCTCTACTTCTGCGTACACCTCCAGGCCTACACCCCGGAGGAAATTTTCACCATCAGTTGCGGCACCACCGGCAATTCCTCCGACGGTCAAAGAAGGTGGACCGGCGACGAAGACACAAAGTACTTATCTTTCCAAGACGCCACCGCTTCAGAGAAGGCATCAACACAATCTCCTTCCACCAATCAAATCCCATACTCCAGTGCACGCTTGTCCCGTTCCCAATTCAACTACTCCTTCCCCGTCTCCCCAGGTCCCAAATTCCTTCGTCTCTTCTTCTACCCTTCCGACTACCCTTCCTTTCCCCGCAACCAAGCTTCTTTCACCCTTCAATCCAACCAATTCACTCTCCTCAACGCTTTCAACGCCTCTCTTAACGCCGACGCTCAAGCCACTCAGACTATCTTCCGAGAATACGTGGTCAACGTCAACGACGGTGAGAGGCTTATCCTCACCTTCACTCCCTCCCATCCAAACTCCTACGCTTTCATCAATGGAATCGAGGTGCTTTCCATGCCAACCGATTTATATTACACTCCACTAGATGATATAGGATTCACGCTAGTGGGACATGGTACGCTCTACTACGTTCAAACCAGCTCTGCGCTCCAGACTGAGTATAGAATAAACTCCGGAGGCCAAGAAATCCTGCCACAAAACGACACCGGTTTGTTCAGGGATTGGGCTGACAAACAAGCTTATTTTATTAAAGAAAATCCAAAGAATAATGATCTACCAGCTGACATCGATGGGAAGATGAGCATAACCGTGAATCCCGATTACGTGGCACCCAAGGAACTGTTCAGAACAGCGCGTAGCCAGGGCACAAACTCTACTCTGAACAAAATCAGCAACCTCACTTGGGTGTTCCCTGTTGATTGTGGCTTCACTTACGTTCTCAGGCTCCACTTTTGCGAGCTTGATCCTCATATCAAGGACATCGGTGACAGACAATTCTTCATTTACATAAATAGCCAGTTGGCTGAAGAAGGTGCAGATGTAATGAAATGGAGTCAGAAACAAAAAGGTCTAGCTGTGCACAGAAACTACGCAATTTTGATTCCTAAGAATGATAATCAGAAAAACGAAGCCGGCTCAAACAACCTCGCCGGACCCAACCCGGACCCGGTTAAGACTCCACAGAACAACAATTCCGACCAAAACGGAAAGACGAGCAGCGGAACTGCAACGACGATAATTGGCGTCGTAGCAGGGGTGGTGTCCGGCGTCGTTTTGATCTCGCTGATCGTTTTCCTTGTCGTGTTTTTCCGACGCAAGAGAACCACAAAGCCAAAAGATTACAAAAATTCAAAGTCTTCCGGGACTTCCAAGTGGGGTCCACTCTCCTTCGCAACGACCAAGTCAACCACCACAAACTCCTCTCTACCGTCGGATCTCTGCCGCCACTTCTCCCTCGCGGAGATCAAAGCTGCCACCAACAACTTCGACGACGTCTTCATTGTCGGAGTCGGGGGATTCGGCCACGTGTACAAGGGCTACATCGACGGCGGTTCCACCCCGGTGGCCATCAAGCGCCTGAAACCGGGTTCCCAGCAGGGTGCGCACGAGTTCATGAACGAGATCGAGATGCTCTCGCAGCTCCGCCATCTTCATCTCGTGTCCCTGATCGGATACTGCAACGAGATGAACGAGATGATCCTGGTGTACGACTTCATGGAGCGTGGCACCCTACGAGACCATCTCTACAACACGGACAACCCCGCTATCACGTGGAAGCAGCGGTTGCAGATCTGCATCGGCGCCGCGCGGGGGCTGCACTATCTCCACTCTGGCGCGAAGCACACGATCATCCACCGCGACGTGAAGAGCACGAACATCTTGTTGGATGATAAGTGGGTTGCAAAGGTTTCGGACTTTGGGCTTTCAAGATTTGGGCCCACAGGCATGGACAAGTCCCACGTGAGTACCCATGTGAAAGGAAGCTTCGGCTATATCGATCCTGAGTATTACAAACGTTATCGTGTGACAGAAAAGTCTGATGTGTACTCCTTCGGTGTTGTGCTGTTTGAGATACTGTGTGGTCGTCCACCTTTGGTTCACACTGCGGAGACGCAACAGGTGTCGCTTTCTAATTGGGTGAGACAGTGTGACCGAAAGGGGACCATCGCAGACATTGTGGAGCCCACATTGAAGAAGAAGATTGCACCAGAGTGCCTGAAGAAGTTTTGTGAGATTGGTATGAGCTGTTTGTTGGAAGATGGGGCGAAGAGACCGAGCATGAAGGATGTGGTTGGGATGCTGGAGTTTACCCTGCAGCTACAAGAAAGTGCAGAGCAACGCGCAATGGAAAAAGGAGAGGAAATTAGTGAATATAGCTTTAGTACTACTGATTTGAGTGTGACTTCGACGACTTCGAGTAGTGAAGACACTAGCTATAGTAATAATACGGTCTTGTCTTGCACTCCTTTCTCAGAGATTATGGATCCAAAGCCGCGTTGA 2505 0.5002 MTSLTFTTSLTLFFLLLYFCVHLQAYTPEEIFTISCGTTGNSSDGQRRWTGDEDTKYLSFQDATASEKASTQSPSTNQIPYSSARLSRSQFNYSFPVSPGPKFLRLFFYPSDYPSFPRNQASFTLQSNQFTLLNAFNASLNADAQATQTIFREYVVNVNDGERLILTFTPSHPNSYAFINGIEVLSMPTDLYYTPLDDIGFTLVGHGTLYYVQTSSALQTEYRINSGGQEILPQNDTGLFRDWADKQAYFIKENPKNNDLPADIDGKMSITVNPDYVAPKELFRTARSQGTNSTLNKISNLTWVFPVDCGFTYVLRLHFCELDPHIKDIGDRQFFIYINSQLAEEGADVMKWSQKQKGLAVHRNYAILIPKNDNQKNEAGSNNLAGPNPDPVKTPQNNNSDQNGKTSSGTATTIIGVVAGVVSGVVLISLIVFLVVFFRRKRTTKPKDYKNSKSSGTSKWGPLSFATTKSTTTNSSLPSDLCRHFSLAEIKAATNNFDDVFIVGVGGFGHVYKGYIDGGSTPVAIKRLKPGSQQGAHEFMNEIEMLSQLRHLHLVSLIGYCNEMNEMILVYDFMERGTLRDHLYNTDNPAITWKQRLQICIGAARGLHYLHSGAKHTIIHRDVKSTNILLDDKWVAKVSDFGLSRFGPTGMDKSHVSTHVKGSFGYIDPEYYKRYRVTEKSDVYSFGVVLFEILCGRPPLVHTAETQQVSLSNWVRQCDRKGTIADIVEPTLKKKIAPECLKKFCEIGMSCLLEDGAKRPSMKDVVGMLEFTLQLQESAEQRAMEKGEEISEYSFSTTDLSVTSTTSSSEDTSYSNNTVLSCTPFSEIMDPKPR 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01556 834 ProSitePatterns Protein kinases ATP-binding region signature. 503 526 IPR017441 GO:0005524
Phco5g01556 834 SUPERFAMILY Protein kinase-like (PK-like) 472 772 IPR011009 -
Phco5g01556 834 CDD STKc_IRAK 503 770 - -
Phco5g01556 834 MobiDBLite consensus disorder prediction 446 465 - -
Phco5g01556 834 FunFam Receptor-like protein kinase FERONIA 469 573 - -
Phco5g01556 834 Gene3D Transferase(Phosphotransferase) domain 1 574 797 - -
Phco5g01556 834 Gene3D Phosphorylase Kinase; domain 1 462 573 - -
Phco5g01556 834 Gene3D - 217 385 - -
Phco5g01556 834 Gene3D - 28 188 - -
Phco5g01556 834 MobiDBLite consensus disorder prediction 372 407 - -
Phco5g01556 834 FunFam Receptor-like protein kinase FERONIA 574 791 - -
Phco5g01556 834 MobiDBLite consensus disorder prediction 791 815 - -
Phco5g01556 834 MobiDBLite consensus disorder prediction 450 465 - -
Phco5g01556 834 MobiDBLite consensus disorder prediction 780 815 - -
Phco5g01556 834 ProSiteProfiles Protein kinase domain profile. 497 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g01556 834 PANTHER OS07G0166700 PROTEIN 481 776 IPR045272 GO:0004714|GO:0006468
Phco5g01556 834 SMART serkin_6 497 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g01556 834 FunFam FERONIA receptor-like kinase 216 404 - -
Phco5g01556 834 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Phco5g01556 834 Pfam Protein tyrosine and serine/threonine kinase 503 768 IPR001245 GO:0004672|GO:0006468
Phco5g01556 834 Pfam Malectin-like domain 34 369 IPR024788 -
Phco5g01556 834 FunFam FERONIA receptor-like kinase 31 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01556 Phco-Chr5 51463714 51466314 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Phco5g01556 Malectin_like 8.8e-32 CL0202