Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01555 ATGCGGGCATCGCCAGGGCGCGAGAGGCATGCGAGCATCGCCAGGGATAGACATCGCAATTTGGCGGGGTGTTACAATTTGCATCCGGAGTATTATAAACGCCACCGTTTGACGGAGAAGTCTGACGTGTACTCTTTGGGGGTTGTGCTGTTTGAGATACTGTGTGGTCGTCCACCTTTGGTTCACACTGCGGAGACGCAGCAGATTTTGCTTTCTCATTGGGTGAGACATTGTGACCGAATGGGGACCATAGGAGAGATTGTGGAGCCAACGTTGAAGAAGAAGATTGCAGCAGAGTGTTTGAAGAAGTTTTGTGAGATTGGGGTGAGTTGTTTGTTGGAAGATGGGTCGCTGAGGCCGTCCATGAAGGATGTGGCTGGGATGCTGGAGTTTACGCTGCAGCTACAAGAAAGTGCAGAGCAACGTGAAAATGTTGCTATTCTTAACGGAGAAGTAGTGTAA 462 0.5 MRASPGRERHASIARDRHRNLAGCYNLHPEYYKRHRLTEKSDVYSLGVVLFEILCGRPPLVHTAETQQILLSHWVRHCDRMGTIGEIVEPTLKKKIAAECLKKFCEIGVSCLLEDGSLRPSMKDVAGMLEFTLQLQESAEQRENVAILNGEVV 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01555 153 ProSiteProfiles Protein kinase domain profile. 1 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g01555 153 SUPERFAMILY Protein kinase-like (PK-like) 29 138 IPR011009 -
Phco5g01555 153 Pfam Protein kinase domain 29 125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g01555 153 PANTHER OS07G0166700 PROTEIN 25 136 IPR045272 GO:0004714|GO:0006468
Phco5g01555 153 Gene3D Transferase(Phosphotransferase) domain 1 9 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01555 Phco-Chr5 51449746 51452185 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Phco5g01555 Pkinase 1.1e-08 CL0016