Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01554 ATGCACCCTTACGAAAGCAGTGCGGATACGAGTTACAGCGACGCCTTCCTGAACGGTCTCGAGATCTTCAAAATCAGCGAAGCCAGCTCAAACAACCTCGCCGGACTCAACCCGGACCCGGTTCAGACTCCACAGAACAACAGTCCCGGCCAAAACGGAAAGACAAGCAGCGGAAGTGCAACGACGATAATTGGCGTCGTAGCGGGGGTGGTGTCCGGCGTCGTTCTGATCTCTCTTGTCGTTTTCTTTGGAAGTGGAACAACTCATACTAAGAGCAAGAATAACGAATCCAAGTCAAAGATGTCGCAGAATTCTTCCTTGCCGACAGATCTCTGCCACCGCTTCTCCCTCGACGAGATGAGAACGGCTACCCAAAACTTCGACGAAGCCTTCATCGTCGGCACCGGGGGATTCGGCCACGTGTATAAGGGCTACATTGACGGCGGTTCCACCCCGGTCGCCATCAAGCGCCTTAAACCGGATTCGCAGCAGGGGGGTCGCGAGTTCCTGAACGAAATCAAGATGCTCTCACAACTACGCCACCGCAATATCGTGTCCCTCATCGGCTACTGCAACGATAATATGGAAATGATCTTGGTCTACAATTTCATGACACGTGGCACCCTCCGCGACCATCTTTACAACACGGACAACCCCGCTATCTCGTGGAAGCAGCGGCTGCAGATATGCATCGGCGCGGCGCGTGGACTGCACTATCTCCACACAGGCGCGAAGCACATGATCATCCACCGGGACGTGAAAAGCACGAACATCTTGTTGGATGATAAGTGGGTTGCCAAGGTTTCGGACTTCGGACTTTCTAGGCTTGGGCCAATTGGAACTTCGAAGGTCCACGTCAGCACCGATGTGAGGGGAAGCTTCGGATATTTATGTAAGGACCTGTAA 906 0.5342 MHPYESSADTSYSDAFLNGLEIFKISEASSNNLAGLNPDPVQTPQNNSPGQNGKTSSGSATTIIGVVAGVVSGVVLISLVVFFGSGTTHTKSKNNESKSKMSQNSSLPTDLCHRFSLDEMRTATQNFDEAFIVGTGGFGHVYKGYIDGGSTPVAIKRLKPDSQQGGREFLNEIKMLSQLRHRNIVSLIGYCNDNMEMILVYNFMTRGTLRDHLYNTDNPAISWKQRLQICIGAARGLHYLHTGAKHMIIHRDVKSTNILLDDKWVAKVSDFGLSRLGPIGTSKVHVSTDVRGSFGYLCKDL 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01554 301 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Phco5g01554 301 ProSiteProfiles Protein kinase domain profile. 127 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g01554 301 Gene3D Transferase(Phosphotransferase) domain 1 204 300 - -
Phco5g01554 301 SMART serkin_6 127 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g01554 301 SUPERFAMILY Protein kinase-like (PK-like) 105 297 IPR011009 -
Phco5g01554 301 ProSitePatterns Protein kinases ATP-binding region signature. 133 156 IPR017441 GO:0005524
Phco5g01554 301 PANTHER OS07G0166700 PROTEIN 111 298 IPR045272 GO:0004714|GO:0006468
Phco5g01554 301 Pfam Protein tyrosine and serine/threonine kinase 133 276 IPR001245 GO:0004672|GO:0006468
Phco5g01554 301 Gene3D Phosphorylase Kinase; domain 1 85 203 - -
Phco5g01554 301 MobiDBLite consensus disorder prediction 34 57 - -
Phco5g01554 301 FunFam receptor-like protein kinase FERONIA 88 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01554 Phco-Chr5 51439166 51440071 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Phco5g01554 PK_Tyr_Ser-Thr 4e-36 CL0016