Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01552 ATGACCTTCAACGCTGTCATCTTCCTCCTTCTCCACCTCTTCACACACTTCCATGGCTACACCCCACTCGATAATTTCACTATCACTTGCGGTTCCTCTGGAACATCCTACGACGGCCAAAGGACATGGACCGGGGACACAGGTTCTGTGCTCTTAACAAACGAAGACGCCACCGTTTCAGCTAAACCCACAACGCTATCTCCTTCCACCAACCATGTCCCCTACGCCACTGCTCGCCTTTCTCCTTCTCAGTTCAGTTACTCCTTCTATTTCAACACAGCGGGCCCAAAATTCCTTCGCCTCTTCTTCTTTCCCGCTTCTTACCCTTCCTTTCCTCGCACCCTCTCATCCTTCTCCGTTCACTCCAACCAATTCATCCTCCTCCAAGATTTCAACGCCTCTCTCAACGCTGACGCTGAAAACAAGGAAATCATATTCAAAGAATACATCGTCTACGTGGAGGACGGTCAGGGTCTTATCCTCATCTTCACTCCCTCGCAGTCCAACTCCTACGCTTTCATCAACGGAATCGAGGTACTTTCCATGCCAAGCAATTTATATTACACGTCCGTAACTGACACGGGCTTCACGAACGTGGGAAGTAGCAATCCCTTCGTCGTTGGAACCCGCTTTGCAATGGAGACTGAGTATAGAATCAATGTGGGAGGACAAGAAATATTGCCCAGAAACGACACCGGTTTGTTCAGAAAATGGGCCGGTGACGAAGAACGTTATTTCATTAAACAAAATACTGGTGTATCAGCAATGGCGGATAGTAAGATGAACATAACAGTGAATCCTGACTACGTGGCACCCGAGGAACTGTACAGAACAGCGCGTAGCATGGGTTCAAACGCCACTCTGAACCAAATCAGCAACCTCACATGGGAGTTTCCCGTTGATTCTGGCTTCACTTACGTCCTCAGGCTCCACTTTTGCGAGTTTGAGCACGATATTGAAGACGCCGGTGAAAGGGTCTTCTTCATTTACATAGCAAGCAAGTTGGCGGAGAGTCGCGCTGATGTTATGTTATGGAGCCATAAACAGAAAGGTTTCGGCGTGTATGAAGACTATGCCGTTTTCATTTCCAAGAATACTTATCAGAAAAAGGTTAATCTCTCCTTACAATTGCATCCTTATGATAGTTGGGGTACCAAGTATAGCGACTCCTTCTTGAACGGTCTCGAGATCTTTAAACTCAGCGACACTAGGTCTAACAGCCTCGCCGGACCTAACCCGGACCCGATTAAGATACCACAGCAAAAGGGAAGTAACAGAAGGCGGATGATTGGTATCACGGCGGGGGTAGTATCCGGTGTCGTTTTCATCTCGCTTGTCGTTTTCTTTGTCCTGTTCTCCACCACTTCCAAGTGGAGTCCGCTGTTGTTCTCAGCGACCAAGTCAACCAACGACCACAATTTTTCTCTGCCGTCTGATCAATGCCGTCGGTTTTCCCTCGTCGAGATCAAAGCCGCCACCAAAAACTTCGACAGCGCCTTCATCGTCGGAGACGGGGGATTTGGCCACGTGTACAAGGGCTACATCGAGGACGGTTCAATCCCCGTCGCCATTAAGCGCCTTAGACAGGGTTCCCAGCAGGGGGCTTGCGAGTTCGTGAACGAGATCCAGATGCTCTCGCAGCTCCGCCACCGCCATCTGGTCTCACTCATCGGTTACTGCTGCGATAACAAAGAGATGATCCTGGTTTATGACTTCATGGGACGTGGAAATGTCCTTACAGGAAACCTCCGCGACCATCTCTACGGTACCGACAATCCCTCCCTCTCGTGGAAGCAGCGCTTGAAGATTTGCATTGGCGCCGCGCGCGGTCTACGCTATCTTCACAGTGGCGCGAAGCACGTGATCATCCATCGGGACGTGAAAACAACGAATATCTTGTTGGATGAGAAGTGGGTGGCGAAAGTTTCGGACTTCGGGCTATCCAAAATTGGGCCGAATGAGATGTCGAAGGCCCATGTGAGCACCGCCGTGAAAGGCAGCTTTGGGTATTTGGATCCGGAGTATTTTATTCGGCAGCGGCTGACGGAGAAGTCTGACGTGTATTCTTTAGGAGTGGTGTTGTTTGAGGTACTCTGTGCCCGTTCTCCTCTGATCCATACGGAAGAAACCGAACAGGTGTCACTAGCTAATTGGGCTAGATATTGTTACCAAAACGGGACAGTGGCGGAGATTGTGGATCCCATATTAAAGGGGAAGATCGCTCCACAGTGTTTCGCCATGTTTTGCGAGATTGGGGTGAGTTGTTTGTCACAAGAAGGGATGCAGAGGCCGTCCATGAACGATGTCGTTTTGATGCTGGAGTCTGCATTGAAACTGCAAGAGAGTGCCGACGAAAGCGAAGAGGAAGTTCGTGAAGATGTGTTTGATACCGAAGAGCACCACAATAGTTCCAAGGACAATGATAAGATGATGCTCGAGTTGTTTTCCGAGATTGTCGATCCAAAACCACGTTGA 2475 0.4949 MTFNAVIFLLLHLFTHFHGYTPLDNFTITCGSSGTSYDGQRTWTGDTGSVLLTNEDATVSAKPTTLSPSTNHVPYATARLSPSQFSYSFYFNTAGPKFLRLFFFPASYPSFPRTLSSFSVHSNQFILLQDFNASLNADAENKEIIFKEYIVYVEDGQGLILIFTPSQSNSYAFINGIEVLSMPSNLYYTSVTDTGFTNVGSSNPFVVGTRFAMETEYRINVGGQEILPRNDTGLFRKWAGDEERYFIKQNTGVSAMADSKMNITVNPDYVAPEELYRTARSMGSNATLNQISNLTWEFPVDSGFTYVLRLHFCEFEHDIEDAGERVFFIYIASKLAESRADVMLWSHKQKGFGVYEDYAVFISKNTYQKKVNLSLQLHPYDSWGTKYSDSFLNGLEIFKLSDTRSNSLAGPNPDPIKIPQQKGSNRRRMIGITAGVVSGVVFISLVVFFVLFSTTSKWSPLLFSATKSTNDHNFSLPSDQCRRFSLVEIKAATKNFDSAFIVGDGGFGHVYKGYIEDGSIPVAIKRLRQGSQQGACEFVNEIQMLSQLRHRHLVSLIGYCCDNKEMILVYDFMGRGNVLTGNLRDHLYGTDNPSLSWKQRLKICIGAARGLRYLHSGAKHVIIHRDVKTTNILLDEKWVAKVSDFGLSKIGPNEMSKAHVSTAVKGSFGYLDPEYFIRQRLTEKSDVYSLGVVLFEVLCARSPLIHTEETEQVSLANWARYCYQNGTVAEIVDPILKGKIAPQCFAMFCEIGVSCLSQEGMQRPSMNDVVLMLESALKLQESADESEEEVREDVFDTEEHHNSSKDNDKMMLELFSEIVDPKPR 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01552 824 Gene3D Transferase(Phosphotransferase) domain 1 579 803 - -
Phco5g01552 824 MobiDBLite consensus disorder prediction 781 809 - -
Phco5g01552 824 Pfam Protein tyrosine and serine/threonine kinase 502 771 IPR001245 GO:0004672|GO:0006468
Phco5g01552 824 Pfam Malectin-like domain 28 399 IPR024788 -
Phco5g01552 824 SUPERFAMILY Protein kinase-like (PK-like) 480 776 IPR011009 -
Phco5g01552 824 ProSitePatterns Protein kinases ATP-binding region signature. 502 525 IPR017441 GO:0005524
Phco5g01552 824 FunFam Receptor-like protein kinase FERONIA 578 794 - -
Phco5g01552 824 CDD STKc_IRAK 502 774 - -
Phco5g01552 824 MobiDBLite consensus disorder prediction 794 809 - -
Phco5g01552 824 FunFam receptor-like protein kinase FERONIA 462 572 - -
Phco5g01552 824 FunFam FERONIA receptor-like kinase 25 183 - -
Phco5g01552 824 FunFam FERONIA receptor-like kinase 211 401 - -
Phco5g01552 824 Gene3D - 211 400 - -
Phco5g01552 824 Gene3D - 25 183 - -
Phco5g01552 824 Gene3D Phosphorylase Kinase; domain 1 459 572 - -
Phco5g01552 824 ProSiteProfiles Protein kinase domain profile. 496 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g01552 824 PANTHER OS03G0124300 PROTEIN-RELATED 6 457 IPR046957 GO:0004672
Phco5g01552 824 SMART serkin_6 496 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g01552 824 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01552 Phco-Chr5 51403582 51408378 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Phco5g01552 Malectin_like 2e-38 CL0202