Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01531 ATGGTTCGCCAAACTGATTTAGTTATCATTGGTGTTTCTGTTGGTTTGGCACTTGGAATTCTGATATCTTGCCTCATATTTTTCGGCATAAGATGGTACAAGAAACGTGCTGCTCATCTTAGATTATCTGCAAATGAGTCTAGTATAACAACTCTTCCAATACGAACAAATGGATTGGGAACAAGTACCGACTTCAGTGCATCACTCGATAGTTCCATAGCCACATCAAGGTCAGAAAATCTCAAGAAAAATTCCCATTTCACTTGGTGGAATCATCAAAACAAAGATCAGTTTACTTCGGCATCAGGCATTCTGAAGTATTCATACAGAGAAATTCAAAAGGCCACACAAAACTTCACGACAACCTTGGGACAAGGATCATTTGGGACAGTTTATAAAGCGACAATGCCTACAGGGGAGGTTGTGGCAGTGAAAGTGCTTGCACCTAATTCCAAACAAGGGGAGAAAGAATTCCAAACAGAGGTATTTCTGCTAGGAAGGCTGCACCACCGGAATCTTGTGAATTTGGTTGGATATTGTGTAGATAAAGGGCAACGCATACTGGTTTATCAGTATATGAGTCATGGAAGTTTAGCAAATCTTTTATATGGTGAAGAAAAAGGATTGAGTTGGGATGAAAGGCTGCAAATTGTTCTTGATATTTCACATGGAATAGAATACCTTCATGAAGGAGCAATCCCACCAGTCATACATCGCGATTTAAAGTCTGCCAACATATTGCTAGATCACTCAATGAGAGCTAAGGTTGCTGATTTTGGACTCTCAAAAGAAGAGATCTTTGATGGCCGGAATTCTGGTCTCAAAGGTACATATGGCTACATGGATCCTGAATACATTTCCACAAGCAAGTTAACAACGAAGAGTGACATATACAGTTTTGGTATCATAGTTTTCGAGCTCATCACTGCCATCCACCCTCATCAAAATTTGATGGAGTATGTTAACCTTGCTGCAATGGATCATGATGGTATAGATGGGATTCTTGACAAGAAAATAGTGGGAAAATGCAATCTTGAAGAAGTGAGGCAGCTTGCAAAGATTGGACACAAATGCTTGCACAAATCACCTAAGAAACGCCCCTCCATAGGTGAGGTTTCTCAGCAAATATCAAGAATAAAGCAAAGGCGTCAGCGGCGTCTGACAGAAGATAACTTTTCATTTGCAAGCAACAACTTTTCTCGAGCTGTGAGTCGATTAGAAGATCGACAGGTTGAACTTAGCAGGATGTCAAGCATTAGCCTAACAGAACCTGTATGA 1278 0.4045 MVRQTDLVIIGVSVGLALGILISCLIFFGIRWYKKRAAHLRLSANESSITTLPIRTNGLGTSTDFSASLDSSIATSRSENLKKNSHFTWWNHQNKDQFTSASGILKYSYREIQKATQNFTTTLGQGSFGTVYKATMPTGEVVAVKVLAPNSKQGEKEFQTEVFLLGRLHHRNLVNLVGYCVDKGQRILVYQYMSHGSLANLLYGEEKGLSWDERLQIVLDISHGIEYLHEGAIPPVIHRDLKSANILLDHSMRAKVADFGLSKEEIFDGRNSGLKGTYGYMDPEYISTSKLTTKSDIYSFGIIVFELITAIHPHQNLMEYVNLAAMDHDGIDGILDKKIVGKCNLEEVRQLAKIGHKCLHKSPKKRPSIGEVSQQISRIKQRRQRRLTEDNFSFASNNFSRAVSRLEDRQVELSRMSSISLTEPV 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01531 425 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 91 192 - -
Phco5g01531 425 SUPERFAMILY Protein kinase-like (PK-like) 87 374 IPR011009 -
Phco5g01531 425 ProSitePatterns Protein kinases ATP-binding region signature. 123 145 IPR017441 GO:0005524
Phco5g01531 425 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 7 384 - -
Phco5g01531 425 CDD STKc_IRAK 123 379 - -
Phco5g01531 425 Pfam Protein kinase domain 121 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g01531 425 FunFam Calcium/calmodulin-regulated receptor-like kinase 2 193 402 - -
Phco5g01531 425 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Phco5g01531 425 SMART serkin_6 117 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g01531 425 Gene3D Phosphorylase Kinase; domain 1 79 192 - -
Phco5g01531 425 ProSiteProfiles Protein kinase domain profile. 117 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g01531 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Phco5g01531 425 Gene3D Transferase(Phosphotransferase) domain 1 193 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01531 Phco-Chr5 51125522 51128733 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Phco5g01531 Pkinase 1.5e-51 CL0016