Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01517 ATGCAAACTGGGGAAGTTTCAGCCCTCAATTATTTACTCCCTTCAAACCCTTGTCCCTTCCCTCCTAACAACTACACAACCATCCAAAACAACATTCCCACATTTCAGTTCCCAAGATTCTCTAGCCAATTATATGGCCACAACCCCAACACTCCCTATGATTTCAGTCCTCAATCATCATGCATCAGCAGCAATTCCACTTCTGATGAGGCAGACGAGCAACAGCTGAGTCTCATCAACGAGAGGAAGCACAGGAGGATGATATCAAACCGAGAATCCGCACGTAGGTCACGGATGAGGAAGCAGAAGCACCTTGATGAGCTTTGGTCGCAGGTCATGTGGCTCAGGAATGAGAACCACCAACTCATAGAGAAGCTGAACCATGTCTCAGAGAACCATGACCAAGTGCTCCAAGAGAATGCTCAGCTGAAAGAGGAAGCCTCAGAACTTCGCCAAATGATCAGGGACATGCAGATACACAGCCCTTGCCCCTCCTTCACCCCTTTTGAAGATGATGTTCCTTGCAGCTCAGCATATCTCAGATCCGATTCTTCAAACCAATCCAACTCATGTAACAACATGGACCTCCTTGGCTGA 597 0.4757 MQTGEVSALNYLLPSNPCPFPPNNYTTIQNNIPTFQFPRFSSQLYGHNPNTPYDFSPQSSCISSNSTSDEADEQQLSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVMWLRNENHQLIEKLNHVSENHDQVLQENAQLKEEASELRQMIRDMQIHSPCPSFTPFEDDVPCSSAYLRSDSSNQSNSCNNMDLLG 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01517 198 Coils Coil 126 160 - -
Phco5g01517 198 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 85 100 IPR004827 GO:0003700|GO:0006355
Phco5g01517 198 Gene3D - 80 135 - -
Phco5g01517 198 SUPERFAMILY Leucine zipper domain 82 132 IPR046347 GO:0003700|GO:0006355
Phco5g01517 198 CDD bZIP_plant_GBF1 83 134 IPR045314 GO:0003700|GO:0006355
Phco5g01517 198 Pfam bZIP transcription factor 82 140 IPR004827 GO:0003700|GO:0006355
Phco5g01517 198 MobiDBLite consensus disorder prediction 179 198 - -
Phco5g01517 198 FunFam BZIP transcription factor 80 132 - -
Phco5g01517 198 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 9 164 IPR044521 -
Phco5g01517 198 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 80 143 IPR004827 GO:0003700|GO:0006355
Phco5g01517 198 SMART brlzneu 78 142 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01517 Phco-Chr5 50920327 50920923 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phco5g01517 bZIP_1 2.6e-14 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g01517 5 50920327 50920923 Phco3g03001 3 56285828 56288278 PCT