Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01500 ATGCCCACTGCCGCCGCCGCCACCGCCGCCAAAACCGTCGACAACATCTGGAATAAGATCGTCGCCGGTGCTCATCCACACCACCCCGTCGCTGCCGGAGACTACATTGGCGATACCGGAGACTACATTGGCGGTGCCGGAGACTACAGTGGCGGTGTTGGAGACTACCGTGGCGCTAGCGCCCCGGAGTTCTATGAGGGCAGCTCCCTGGAGAATTTATCTTCTTCGTCTCTCCCTGTTTCTCTCTCTCTTCCTCTCCCTTTCCACGCCCAAGGCCCTTCCTCCGTAGAACCCTTTGGAATGGGCACTGCGCCCTCCAATTTAGTTCACAAAGGTAGGAGAAGGGTGGTGGAGGAACCCATGGATAAGGCCACGCTTCAGAAGCAGAGGAGGATGATTAAGAATCGCGAGTCTGCAGCTAGGTCCCGGGAACGCAAGCAGGCTTACACATTGGAGCTGGAGTACAAGGTTCAACAGCTGGAGCAAGAGAATACCCGCTTAGTTAATGAAGAGACTGAGAATAGAAGGCAGAGGAGAAAGCAGGTCTGTAATATATCTGCTCTCCTTTGGACATCTTCATTTGCATGTTCTTGTCTTCATTTGCATGTTCTTGTGTATTTTAGCAGCTATGCTGTCTTGTGA 642 0.5296 MPTAAAATAAKTVDNIWNKIVAGAHPHHPVAAGDYIGDTGDYIGGAGDYSGGVGDYRGASAPEFYEGSSLENLSSSSLPVSLSLPLPFHAQGPSSVEPFGMGTAPSNLVHKGRRRVVEEPMDKATLQKQRRMIKNRESAARSRERKQAYTLELEYKVQQLEQENTRLVNEETENRRQRRKQVCNISALLWTSSFACSCLHLHVLVYFSSYAVL 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01500 213 SUPERFAMILY Leucine zipper domain 127 177 IPR046347 GO:0003700|GO:0006355
Phco5g01500 213 CDD bZIP_plant_BZIP46 127 167 - -
Phco5g01500 213 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 125 177 IPR004827 GO:0003700|GO:0006355
Phco5g01500 213 SMART brlzneu 123 187 IPR004827 GO:0003700|GO:0006355
Phco5g01500 213 Pfam bZIP transcription factor 124 170 IPR004827 GO:0003700|GO:0006355
Phco5g01500 213 Gene3D - 126 181 - -
Phco5g01500 213 Coils Coil 150 180 - -
Phco5g01500 213 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 4 179 IPR043452 GO:0003700|GO:0045893
Phco5g01500 213 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 130 145 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01500 Phco-Chr5 50735085 50736120 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phco5g01500 bZIP_1 1.8e-12 CL0018