Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01442 ATGGGATCTCAAGGTGGGGCAGTTCAAGAGCCAAATACTACTACTAGTACTACCCCTTTGGTTAGGCAAGGATCCTTGTATAATCTGACCCTAGATGAGGTGCATAACCAGCTTGGGAATTTGGGGAAGCCACTTGGCAGCATGAATCTTGATGAGTTGCTGAAGAGTGTGTGGATTGCTGAAGTTCGCGGTGAGGCCCCGGGCTTGGACTTTGGTGGTGGTGATGCTGACATGCAGGATGACCCTGCTGCTTCTAGTTCCTTTCTGAATCCTCAGGGCAGTCTAACTTTGTCAAGGGATCTTAGCAGGAAAACTGTTGATGAGGTGTGGAGAGATATGCAACTGAAGAAGGGCACTTGTAGGGATAAGAAAACACAGGAAAGACAGCCTACAATGGGTGAGATGACTCTGGAGGACTTCTTGGTGAAGGCTGGAGTGGTTGCTGATTCAAATGGGGCTTCCTCACAACATGGCCATTGGATGCAATACCAGCACCCTTCAGTGCAGCATCAGAATATGGTTGTTGGGGGTTATGTGGCTGGCCATGCCATTCAGCAGCCTTTCCACACTACGTTGAATCTAGTTTTGGATGCAGCATATTCTGAACCGGCTTCTTTAGTGGGAGCATTATCGGATACACAAACTCCCAGTCGAAAAAGGCTTGCCTCTGGTGATGTGGTGGAGAGAACTGTGGAGAGGAGGCACAAGAGAATGATTAAAAATAGAGAATCTGCTGCTCGATCTCGGGCAAGAAGACAGGCATACACACAAGAACTGGAGATTAAAGTTAAGCAATTAGAAGAGGAGAATGAAAGGCTTAGAAGACTGAATGAGATCGAGAAGGCATTGCCATCTGAGCCACCACCTGAGCCTAAGCAACAGCTACGCAGAACGAGTTCAGCCATCTTTTGA 912 0.4781 MGSQGGAVQEPNTTTSTTPLVRQGSLYNLTLDEVHNQLGNLGKPLGSMNLDELLKSVWIAEVRGEAPGLDFGGGDADMQDDPAASSSFLNPQGSLTLSRDLSRKTVDEVWRDMQLKKGTCRDKKTQERQPTMGEMTLEDFLVKAGVVADSNGASSQHGHWMQYQHPSVQHQNMVVGGYVAGHAIQQPFHTTLNLVLDAAYSEPASLVGALSDTQTPSRKRLASGDVVERTVERRHKRMIKNRESAARSRARRQAYTQELEIKVKQLEEENERLRRLNEIEKALPSEPPPEPKQQLRRTSSAIF 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01442 303 MobiDBLite consensus disorder prediction 1 21 - -
Phco5g01442 303 MobiDBLite consensus disorder prediction 279 303 - -
Phco5g01442 303 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 236 251 IPR004827 GO:0003700|GO:0006355
Phco5g01442 303 Coils Coil 249 283 - -
Phco5g01442 303 Gene3D - 231 283 - -
Phco5g01442 303 SUPERFAMILY Leucine zipper domain 233 278 IPR046347 GO:0003700|GO:0006355
Phco5g01442 303 MobiDBLite consensus disorder prediction 70 91 - -
Phco5g01442 303 Pfam bZIP transcription factor 233 278 IPR004827 GO:0003700|GO:0006355
Phco5g01442 303 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 231 275 IPR004827 GO:0003700|GO:0006355
Phco5g01442 303 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 231 283 - -
Phco5g01442 303 SMART brlzneu 229 297 IPR004827 GO:0003700|GO:0006355
Phco5g01442 303 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 21 301 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01442 Phco-Chr5 49891163 49894317 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phco5g01442 bZIP_1 2e-13 CL0018