Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01437 ATGGAAGATCAGCAGGGGCAACAGCAGCAGCAGCACCAACAACAACAGGAACCCAATAGTCCAAACCAACAAGCCTCCGAGAGAAGTGAACCCGTGAGGTCAAGATGGACTCCCAAGCCAGAACAAATCCTTATTCTCGAGTCCATCTTCAACAGTGGCATGGTTAACCCCCCAAAAGATGAAACCGTCAGAATAAGAAAGCTGCTTGAGAAATTTGGCACCGTTGGTGATGCCAACGTCTTCTATTGGTTCCAGAACCGCCGCTCTCGCTCCCGCCGCCGCCAACGCCAGATTCAGGCCACCCTTAACCAAGGCGGCGGTGCAAGTACTAATCCATATCAACACCACCATCAAAACAACCCTGCTCTTGTAGCAAACATGGGTTTTGCTACTGCTAATTCCTCTTTCATCAACCCATCTTATGTGCCTGGTTCTTCTTCCTCCTGCGGTGGCGGCGGCAGTGGTAGTGGTGAAGAAAGCTTGGATGATTTCTTCTCACCGTCTACTCAAATGGGTTTTCCAGGAATTGATCATCATACTTCAGCTGCATCATCATCGGTTTTGTACCCTCTTGGACCTTCCAATTTGAACTATCACTCTGGATTTGGGGGAAATTCAGGACTCATCACGGTGTTCATCAATGGGGTTCCAACAGAAGTTCCAAGGGGGCCAATGGACATCAAAACAGCGTTTGGAGAAGATGTAATGTTAGTTCATTCCTCTGGAGTGTCAGTTCCCACCAATGAGTTTGGTTTCTTGATGCTGGGTTTGCAGCATGGTGAAAGCTACTTTGTGGTTTCAAAGCAAACACAAGTATGA 819 0.4799 MEDQQGQQQQQHQQQQEPNSPNQQASERSEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGTVGDANVFYWFQNRRSRSRRRQRQIQATLNQGGGASTNPYQHHHQNNPALVANMGFATANSSFINPSYVPGSSSSCGGGGSGSGEESLDDFFSPSTQMGFPGIDHHTSAASSSVLYPLGPSNLNYHSGFGGNSGLITVFINGVPTEVPRGPMDIKTAFGEDVMLVHSSGVSVPTNEFGFLMLGLQHGESYFVVSKQTQV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01437 272 Pfam Homeodomain 33 93 IPR001356 GO:0003677
Phco5g01437 272 Gene3D - 33 100 - -
Phco5g01437 272 MobiDBLite consensus disorder prediction 1 31 - -
Phco5g01437 272 FunFam WUSCHEL-related homeobox 11 33 100 - -
Phco5g01437 272 MobiDBLite consensus disorder prediction 1 38 - -
Phco5g01437 272 SUPERFAMILY Homeodomain-like 28 101 IPR009057 -
Phco5g01437 272 MobiDBLite consensus disorder prediction 96 117 - -
Phco5g01437 272 SMART HOX_1 31 98 IPR001356 GO:0003677
Phco5g01437 272 ProSiteProfiles 'Homeobox' domain profile. 29 94 IPR001356 GO:0003677
Phco5g01437 272 MobiDBLite consensus disorder prediction 92 117 - -
Phco5g01437 272 PANTHER WUSCHEL-RELATED HOMEOBOX 11 12 269 IPR044558 GO:0003700|GO:0048830
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01437 Phco-Chr5 49809910 49812286 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Phco5g01437 Homeodomain 1.1e-12 CL0123