Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01418 ATGAATAAACCTTTCTTTTCCAATTGCAATATCAAACCTACAAAGATGAAGACTTTCTCCTCAATTCAACAACCCCACCATTTTCGCTGTACAAGATTTTTCTCTCACACTACCACAAGGACTCAACTTTCTTTTCCAACAAAGGTCTTCTTTTGCCTGGCAAAATCTGGAACAGACGGGTCATTGCATTCAAATGTGGTGTCTCCTACACTATTAGCAGGAGAAAAGGAAGAAGCCAAGGCTGTGTTGACCTTGTTTTTGAAGAAACAAGGTTTGAGCAATGCGATTGCTGCTAGAACCATCCACAAGTCAGATCTTTTTGTTGATCACCTTATCTCAAAGCTTCATTCTAAACACAAATCTTGGTATCTCGCAGGGAGAGAGCTTACAACTATGGAGATCAGGGATGTGCTTTTCCCTTATCTTGAATCACTTTTTGAAGAGCATGGAGACATTCTAGTGGATGTGGTAGAAAACTATCCAAATCCACCTGTTAAGGATAAATCAGCTGTGCCAATTCCTCCTTCTAATCCAGTGTTAGACTCTAAGAAGCTTAAAGCTTTGTCCCGAGTGAGCGAGATCGACTGGAATGGTGGCATTCTTCGCCCTCATATTGTATATTTGATGGAACTTGGTATGGATATAGACCAGATTAGGAGTATCACCCGAAGATTCCCATCTTTTGCCTACTATAGCTTGGAAGGTAAAATTAAACCAGTTGTCGAGTTTCTTCTTGAACTTGGAGTTCCAAAAGAGCGCATTCCCTCTATCCTCTCTAAAAGGCCTCAAATATGTGGAATTAGTCTATCAGAAAATCTTAAACCTACCATGAAGTTCTTTGAATCTTTGGGTGTTGACAAGAGGCAATGGCCGAAGGTGATCTATCGCTTTCCAGCCATGCTAACTTACAGCAGGCCTAAAGTAATGGAAAACATAGATTTTCTCCTTGAATTGGGTCTCTCAGAGGAGAGTATAGGTAAGATTTTAACTCGCTGCCCCAATATTGTTAGTTACAGCGTAGAGGACAATCTTCGACCCACCGCTAAGTACTTCCGTTCTTTGGGGGTAGATGTTAGCATTCTTCTATTCAGATGCCCGCAGAATTTTGGTCTTAGCATTGAGACCAACCTAAAGCCTGTAACAGAATTTTTCTTGGGAAGGGGATACACTTTGGAAGAAATTGGGACCATGATTTCAAGATATGGAGCCTTGTATACATTCAGCTTGACTGAAAATTTGATTCCAAAATGGGATTTCTTTTTGACCACGGGTTACCCCAAGTCTGAGCTGGTCAAGTTCCCTCAATATTTTGGATACCGTTTTGAGGAAAGGATTAAACCTAGATTTGCAATTATGAAAAAATCAGGAGTGAAGTTACTGCTCAACCAGGTTCTTTCACTGTCAAGCAGTAACTTTGATGAGGCCTTGAAAAAGAAAATGAAGAAAAAGCTAGAAGGTTAG 1461 0.4045 MNKPFFSNCNIKPTKMKTFSSIQQPHHFRCTRFFSHTTTRTQLSFPTKVFFCLAKSGTDGSLHSNVVSPTLLAGEKEEAKAVLTLFLKKQGLSNAIAARTIHKSDLFVDHLISKLHSKHKSWYLAGRELTTMEIRDVLFPYLESLFEEHGDILVDVVENYPNPPVKDKSAVPIPPSNPVLDSKKLKALSRVSEIDWNGGILRPHIVYLMELGMDIDQIRSITRRFPSFAYYSLEGKIKPVVEFLLELGVPKERIPSILSKRPQICGISLSENLKPTMKFFESLGVDKRQWPKVIYRFPAMLTYSRPKVMENIDFLLELGLSEESIGKILTRCPNIVSYSVEDNLRPTAKYFRSLGVDVSILLFRCPQNFGLSIETNLKPVTEFFLGRGYTLEEIGTMISRYGALYTFSLTENLIPKWDFFLTTGYPKSELVKFPQYFGYRFEERIKPRFAIMKKSGVKLLLNQVLSLSSSNFDEALKKKMKKKLEG 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01418 486 PANTHER CGI-12 PROTEIN-RELATED 168 477 IPR003690 GO:0003690|GO:0006355
Phco5g01418 486 Pfam mTERF 207 385 IPR003690 GO:0003690|GO:0006355
Phco5g01418 486 Pfam mTERF 307 472 IPR003690 GO:0003690|GO:0006355
Phco5g01418 486 SMART mt_12 326 357 IPR003690 GO:0003690|GO:0006355
Phco5g01418 486 SMART mt_12 255 286 IPR003690 GO:0003690|GO:0006355
Phco5g01418 486 SMART mt_12 427 458 IPR003690 GO:0003690|GO:0006355
Phco5g01418 486 SMART mt_12 291 321 IPR003690 GO:0003690|GO:0006355
Phco5g01418 486 SMART mt_12 219 250 IPR003690 GO:0003690|GO:0006355
Phco5g01418 486 SMART mt_12 359 390 IPR003690 GO:0003690|GO:0006355
Phco5g01418 486 SMART mt_12 395 426 IPR003690 GO:0003690|GO:0006355
Phco5g01418 486 FunFam Transcription termination factor MTERF5 chloroplastic 262 482 - -
Phco5g01418 486 Gene3D Transcription termination factor 3, mitochondrial 262 485 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phco5g01418 mTERF 1.8e-32 No_clan