Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01342 ATGCGAATGAGTTGTAACGGGTGTCGTGTGTTGCGAAAAGGGTGCAGTGAAGATTGTAGCATAAGGCCGTGTTTGGAATGGATCAAGAACCCAGAATCGCAAGCTAATGCCACCGTTTTTCTTGCTAAGTTCTATGGTCGTGCTGGTCTCATGAACCTCGTCAACGCTGGCCCTCAACACCTTCGACCAGCGATTTTTCGTTCGTTGTTGTACGAGGCATGTGGTCGAATTGTGAACCCAATTTACGGGTCAGTGGGTTTGTTGTGGTCGGGGAGCTGGCAGCTTTGTCAAGCCGCCGTGGAAGCCGTTTTGAAAGGGGAGTCCGTCACACCAATCACATCGGAAGTGGCGGCTAATGGGCGGGCGCCGCCACTGAAGGCCTACGACATTCGCCACGTGTCGAAAGATGAGAACTCAGCGAACCGGAGTCAGAAGGGCAAGAGTCGAATCCGGGTTAAGCGAACCGGTGGCGACGTAGTTATGAAGCCGAATGCCTCGAAGGGAATCGGGTTTGTTCCGGTTGAACCGGAGACGAAGCAGAGTAGAAGTCATGAGTCGGGACTAAGCCACTTGTCGGAAGCTGCGGCCATTTTGGAAGGAGAGAGCAAAGAGAGTGAGAGTGTGGTGTCGGTGGAAACTTGTAACGTATTTGGTGAGACAAAGATGAGTGATCGAATCGATGAAAGTGGTAATGAAATTGGTTTGGAATTGAGGCTTGGGTTTGAACCGGTTTCACGTGTTCATCACATGGTTCCAATGAAGAAGAGAAGAATAGAAGTGAAAAGTAGCGGTGACTCAATGGAGTTAGGACTCGAGTCCTCGGCTTGA 828 0.5072 MRMSCNGCRVLRKGCSEDCSIRPCLEWIKNPESQANATVFLAKFYGRAGLMNLVNAGPQHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGESVTPITSEVAANGRAPPLKAYDIRHVSKDENSANRSQKGKSRIRVKRTGGDVVMKPNASKGIGFVPVEPETKQSRSHESGLSHLSEAAAILEGESKESESVVSVETCNVFGETKMSDRIDESGNEIGLELRLGFEPVSRVHHMVPMKKRRIEVKSSGDSMELGLESSA 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01342 275 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 237 - -
Phco5g01342 275 MobiDBLite consensus disorder prediction 132 151 - -
Phco5g01342 275 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Phco5g01342 275 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Phco5g01342 275 PIRSF AS2 1 274 IPR017414 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01342 Phco-Chr5 48486128 48487473 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phco5g01342 LOB 1.1e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g01342 5 48486128 48487473 Phco5g01342 5 48486128 48487473 ECH