Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01253 ATGTCAGAGCCACATGCTCTTACTACTCATGGTGGTGATCACAATGCTGGATCAGGAAGCAGACGTAGAGGTCCTAGTTTCAGACGTACCATGGCAACACAAACACAAGATGAACCAATGCTAGGATCTTCGCCTGCAACACCATGTGGGGCTTGCAAGTTCTTGAGGAGGAAGTGCATTGGAGGCTGCATCTTTGCACCCCACTTTGGCACTGACCAAGGTGCAGCCAAGTTTGCAGCTGTGCACAAGGTGTTTGGGGCGAGCAATGTGTCGAAGCTCTTGTCCAACATTCCGGCCAACCGCCGCCATGAAGCGGCTACAACCATATCCTATGAGGCTCAGGCAAGGCTGTCTGATCCGGTTTACGGTTGTGTCTCCACCATCCTTGCTCTGCAACAACAGGTAGCATCTATGCAAGCAGAGCTAGCTATGGTGCAAACTCAGCTGATGAATAGTAGGTTTGCATATGCAAGTGCTCTTGAGACCACACAAGTACAGCAACCAAACATGAATGCAGCAGCACTACAACCAGCATATTCCAACAACTCATGTGCTTCCACCAACCTCATGAACTTGAGCAGCTTCAACAATAACCCTGCTGGCTTTGACCTTGCAATGCACACAGCACCCTCATCAAGCACTTTAGAGCCTCTTCAACTAACAAGGCTGTCGAAATGTGAAGAAGATGAAGAAGAAGAAGAAGAAGAAAGCAGGACCCAGCCAGGCTTCAACCACCATTAA 741 0.4912 MSEPHALTTHGGDHNAGSGSRRRGPSFRRTMATQTQDEPMLGSSPATPCGACKFLRRKCIGGCIFAPHFGTDQGAAKFAAVHKVFGASNVSKLLSNIPANRRHEAATTISYEAQARLSDPVYGCVSTILALQQQVASMQAELAMVQTQLMNSRFAYASALETTQVQQPNMNAAALQPAYSNNSCASTNLMNLSSFNNNPAGFDLAMHTAPSSSTLEPLQLTRLSKCEEDEEEEEEESRTQPGFNHH 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01253 246 MobiDBLite consensus disorder prediction 1 26 - -
Phco5g01253 246 MobiDBLite consensus disorder prediction 206 220 - -
Phco5g01253 246 Pfam Lateral organ boundaries (LOB) domain 48 146 IPR004883 -
Phco5g01253 246 Coils Coil 128 148 - -
Phco5g01253 246 MobiDBLite consensus disorder prediction 206 246 - -
Phco5g01253 246 ProSiteProfiles LOB domain profile. 47 149 IPR004883 -
Phco5g01253 246 PANTHER LOB DOMAIN CONTAINING PROTEIN 46 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01253 Phco-Chr5 46845865 46849706 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phco5g01253 LOB 1.5e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g01253 5 46845865 46849706 Phco5g01253 5 46845865 46849706 ECH