Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01138 ATGCTGTCTATTATTCCCTTTGATATCTCTGTATCCTCAACTCTCACCAAATTCTCACCTTTCAATGTTAGTTCTAAGAAACCAAACTATTTCCCTTCCAAGGTTTCACCTTCCTCCAATGAATTCTCTCTCCTTTCTCTCTCCAACAAAGGAATTTGCAGGGCTAGTGAAGTTGTTGATTTGTTCCCAACAGTGTCCCCCGAAATTGTTGTCCGCGAGGCAAGGTTAGAGGACTATTGGGGAGTAGCAGAGACTCACTGTAACTGCTTCTTCCCTGAATATTCCTTCCCATTAGATTTTGTGCTCAGGATAGATAGATTGGTGGTGGCTATGTTAGCAGCTATGTTAGCCGGATTCTTCAGGCCAAGACAGTGCAGAAAAATCTGTTTGGTGGCTGTTATTGGCTCCTCACATGATGAGTCCTTTTCATTTGGAAGTGAGGGTCACAAGATTGGTAGTTTTGATGGAAAATTCAGTCTCAACAGGAGTTATGTGGCTGGTATATTGACAGTAGACAATAATGCAGACTTTCTACCAAGAAAGGGGCCACGGCGACATAGAAGGACTGGAATTGCATACATATCAAATGTGGCAGTGAGGGAAAATTTTCGGAGGAAGGGAATAGCTAAAAAACTGATAGAAAAAGCTGAGTCTCATGCCAGAAGTTGGAGCTGTCGTGCTATTGCACTGCATTGTGACTTGGACAATCCTGTGGCCACAATGTTATACAAAGGCCAAGGGTACAAACGTGTCCTGGTTCCAGAAGGAGCAAAGTGGCCTCAACCAAGAACCTCAACAGATATGAGATTCAACTTCATGATGAAACTTCTAAAACATTCACCATCTTCTAGTTAG 855 0.4281 MLSIIPFDISVSSTLTKFSPFNVSSKKPNYFPSKVSPSSNEFSLLSLSNKGICRASEVVDLFPTVSPEIVVREARLEDYWGVAETHCNCFFPEYSFPLDFVLRIDRLVVAMLAAMLAGFFRPRQCRKICLVAVIGSSHDESFSFGSEGHKIGSFDGKFSLNRSYVAGILTVDNNADFLPRKGPRRHRRTGIAYISNVAVRENFRRKGIAKKLIEKAESHARSWSCRAIALHCDLDNPVATMLYKGQGYKRVLVPEGAKWPQPRTSTDMRFNFMMKLLKHSPSSS 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01138 284 Pfam Acetyltransferase (GNAT) family 176 248 IPR000182 GO:0016747
Phco5g01138 284 Gene3D - 67 251 - -
Phco5g01138 284 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 6 281 - -
Phco5g01138 284 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 64 277 IPR016181 -
Phco5g01138 284 CDD NAT_SF 184 231 - -
Phco5g01138 284 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 69 273 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01138 Phco-Chr5 44227436 44230125 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Phco5g01138 Acetyltransf_1 1.4e-12 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco5g01138 5 44227436 44230125 Phco6g02195 6 43061770 43064198 PCT