Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco5g01097 ATGAGCAATAGAACTAGAAGGTCAAGCTTGAAAACTTTTCATCTTCCAAAACGTGAAGGACGAGTAGCAGCAGCCATTTCTCCCATAAAATATTCAAGCTGTTTAAGATTCAAACCCTTTTCCCATTCTTCAAAATTCAAAACAAAAACAGAAATTTTTTTCAATCATTCCACCAATCACCACCAAGAAAGGGCCAAGTCAAAGTCTTCTCCATTAGCTCCTCATCTCAACTCTCATTTCTTCCGCACTCAACCCAAATCCCCCAAAAAGAATACATCTTTTGCATCCATCACCAACATCTTTATATTCCATTCACGCACATACCCATATGAACAGACACACACAATTGAAACATCACAAAACATGTTCCTCAAAATCCAATTTTTGTTCCTCACCCTTTTTCTGGCGGCCACCGTTGCTACCGCCATAGACCCAGGTTCCACTCTTTCGGCCTCTTCCACCTCCAATCAAACGTGGTCTTCTCCCAGTGGCACCTTCTCCCTCGGATTCATCTCCTTTCAGCCTCCGACCACCCCTCCTTCCTTCATCGCCGCCATCGTTTACACCGGCGGCAACCCTGTTGTCTGGTCCGCTGGCAACGGCACCGCAGTCGACTCCGGCGGGTCCTTACGGTTCCTCTCCTCCGGCTCCCTCCGCCTGGTCAATGGCTCGGGCGCCACCGTGTGGGACTCTGGAACGGCGGGCGCAACTTCAGCAGCCCTTGAGGACAGTGGCAATTTGGTAATTTCAAACGGCACTAGCACCCTCTGGTCAAGCTTTGAGAACCCCACTGATACCCTGGTGCCCACTCAGAATTTCAGTGTTGGTAAGGTTCTCACTTCTGAAAGTTATGTTTTTAGCCTTAGTGGAATTGGGAATTTGTCTCTGAAGTGGAACAATAGCATAGTGTACTGGACCCAGGGTTTGAATTCCTCTGTGAATGTGAGTTTAGAGTCCCCTGTGTTGACTTTGACATCAATTGGGCTTTTGGAACTTTCTGATGTGAATTTGAGTCCTCCTGTTCTTGTTGCCTATAGTAGTGACTATGATCAGAATGCTGATGTCTTTAGGGTGTTGAAGTTGGATAATGATGGGAATTTGAGGATTTATAGTACTAATCAGGATGGTGGAACTTCTACTGTTAGATGGGCTGCTGTTGCAGATCAATGTAAGGTTTATGCTTACTGTGGGAACTATGGTGTGTGCAGTTACAATGATTCCAGCACGGTATGTGGTTGCCCTTCAGAGAATTTTGAGATGGTTGATCCGAATGATGGTAGGAAAGGGTGCAGGAGGAAGGTGAGTCTTGATAGTTGTCAAGGAAGCGCGACCATGTTGACCTTGGATCATTCCGTGGTGTTGAGTTATCTCCCTGAGGCTTCATCGGAGACGTTTTTCATTGGTTTATCAGCGTGTAGAATGAATTGTCTTTCGGGTTCAAGAGCATGTTTTGCTTCTACTTCCTTGTCAGATGGCACAGGGCAGTGTGTACTAAGATCAGTAGATTTTGTTAGTGGATATCAGGATCCTTCTCTTCCTAGCACTTCTTATTTCAAGGTTTGTCCGCCTTTGGCACCAAATCCACCATCCTCTTCGGCAGAGACTGTGAGGGAAAGGGGGTCCAAGGTGCCTGCATGGGTTGTGGTGGTGGTTGTTTTGGGTACCCTTCTGGGTTTGGTAGCCTTGGAAGGGGGTTTGTGGATGTGGTGTTGTAGGAATAACAAGAGGTTTGGTGGGTTGTCAGCTCAGTATGCTCTTCTTGAGTATGCTTCTGGTGCTCCAGTGCAGTTCTCGTACAAGGAGCTCCAGCAAGCGACCAAGGGGTTCAAGGAGAAGCTTGGAGCTGGTGGATTTGGTGCTGTTTATAGAGGCACTCTTGTTAATAAAACTGTTGTTGCAGTGAAGCAACTTGAGGGCATTGAGCAAGGTGAGAAGCAGTTTCGGATGGAAGTTGCCACTATAAGTAGCACTCATCATCTGAATTTGGTGAGGCTTATTGGGTTTTGCTCAGAAGGGCGCCACCGGCTTCTGGTTTATGAGTTCATGAAAAATGGATCTCTTGATAATTTTCTATTCCTGACAGAAGAGCGTTCAGGAAAATTGTTGAATTGGGATTACCGATACAACATTGCACTGGGCACAGCAAGAGGCATCACATACCTTCACGAGGAGTGCCGTGACTGCATAGTCCATTGTGACATAAAGCCTGAAAACATTCTCTTGGATGAGAATTATGTTTCCAAAGTCTCTGATTTTGGTCTTGCAAAGCTTATTAATCCTAAGGACCATAGGCATCGGACCTTAACAAGTGTGAGAGGAACCAGAGGATACTTAGCTCCCGAGTGGCTTGCAAATCTTCCAATAACATCCAAATCTGATGTTTACAGCTATGGTATGGTTTTGTTGGAGATTGTGAGTGGAAGGAGAAATTTTGATGTTTCAGAGGAAACAAACAGGAAGAAGTTCTCCATTTGGGCCTATGAAGAGTTTGAGAAAGGTAACATCAGTGAAATTTTGGACAAAAGACTAGCTCGGCAAGAAGTTGATATGGAGCAAGTAAGAAGGGCAATTCAGGCAAGCTTTTGGTGCATCCAAGAGCAGCCATCTCAGAGACCAACAATGAGCAGAGTGCTGCAAATGCTAGAAGGGGTAACTCAGTTTGAAAAGCCACCTGCCCCAAAATCAGTGATTGAAGGAACTGTTAGTGGAACAAGCACATACCTGAGTAGCAATGCCAGTGCATTCTCCACGGTTGGAGTTTCACCCCCTGGACCCTCCTCCTCTACATCATCATTTCAGATTAGTAGTAATGTTTCAACCTTCAACTCAGGAAGGAACCCTGAGAAGCCAACCTCAACCCTTTTACAATCAGACACATGA 2880 0.4569 MSNRTRRSSLKTFHLPKREGRVAAAISPIKYSSCLRFKPFSHSSKFKTKTEIFFNHSTNHHQERAKSKSSPLAPHLNSHFFRTQPKSPKKNTSFASITNIFIFHSRTYPYEQTHTIETSQNMFLKIQFLFLTLFLAATVATAIDPGSTLSASSTSNQTWSSPSGTFSLGFISFQPPTTPPSFIAAIVYTGGNPVVWSAGNGTAVDSGGSLRFLSSGSLRLVNGSGATVWDSGTAGATSAALEDSGNLVISNGTSTLWSSFENPTDTLVPTQNFSVGKVLTSESYVFSLSGIGNLSLKWNNSIVYWTQGLNSSVNVSLESPVLTLTSIGLLELSDVNLSPPVLVAYSSDYDQNADVFRVLKLDNDGNLRIYSTNQDGGTSTVRWAAVADQCKVYAYCGNYGVCSYNDSSTVCGCPSENFEMVDPNDGRKGCRRKVSLDSCQGSATMLTLDHSVVLSYLPEASSETFFIGLSACRMNCLSGSRACFASTSLSDGTGQCVLRSVDFVSGYQDPSLPSTSYFKVCPPLAPNPPSSSAETVRERGSKVPAWVVVVVVLGTLLGLVALEGGLWMWCCRNNKRFGGLSAQYALLEYASGAPVQFSYKELQQATKGFKEKLGAGGFGAVYRGTLVNKTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNGSLDNFLFLTEERSGKLLNWDYRYNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYVSKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFDVSEETNRKKFSIWAYEEFEKGNISEILDKRLARQEVDMEQVRRAIQASFWCIQEQPSQRPTMSRVLQMLEGVTQFEKPPAPKSVIEGTVSGTSTYLSSNASAFSTVGVSPPGPSSSTSSFQISSNVSTFNSGRNPEKPTSTLLQSDT 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco5g01097 959 Gene3D Transferase(Phosphotransferase) domain 1 682 895 - -
Phco5g01097 959 PANTHER OS07G0415500 PROTEIN 128 893 - -
Phco5g01097 959 ProSiteProfiles Bulb-type lectin domain profile. 264 382 IPR001480 -
Phco5g01097 959 FunFam S-receptor-like serine/threonine-protein kinase 580 681 - -
Phco5g01097 959 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 139 262 - -
Phco5g01097 959 Gene3D Phosphorylase Kinase; domain 1 579 681 - -
Phco5g01097 959 Pfam D-mannose binding lectin 194 287 IPR001480 -
Phco5g01097 959 ProSitePatterns Protein kinases ATP-binding region signature. 613 635 IPR017441 GO:0005524
Phco5g01097 959 CDD STKc_IRAK 613 883 - -
Phco5g01097 959 Pfam S-locus glycoprotein domain 351 414 IPR000858 GO:0048544
Phco5g01097 959 CDD B_lectin 150 263 IPR001480 -
Phco5g01097 959 Gene3D - 262 385 IPR036426 -
Phco5g01097 959 ProSiteProfiles Protein kinase domain profile. 607 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g01097 959 SUPERFAMILY alpha-D-mannose-specific plant lectins 193 309 IPR036426 -
Phco5g01097 959 SUPERFAMILY Protein kinase-like (PK-like) 590 882 IPR011009 -
Phco5g01097 959 ProSitePatterns Serine/Threonine protein kinases active-site signature. 729 741 IPR008271 GO:0004672|GO:0006468
Phco5g01097 959 SMART blect_4 150 263 IPR001480 -
Phco5g01097 959 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 263 385 - -
Phco5g01097 959 MobiDBLite consensus disorder prediction 915 959 - -
Phco5g01097 959 SMART serkin_6 607 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g01097 959 ProSiteProfiles Bulb-type lectin domain profile. 150 262 IPR001480 -
Phco5g01097 959 Pfam Protein kinase domain 610 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco5g01097 959 Gene3D - 138 261 IPR036426 -
Phco5g01097 959 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 682 891 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco5g01097 Phco-Chr5 40666058 40668937 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Phco5g01097 Pkinase 2.9e-52 CL0016